RNA–Protein interactions for RNA: ENST00000558618.2

AC004943.1-202, humanhuman

TSL 3 BASIC

Gene AC004943.1, Length 503 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.1-202ENST00000558618 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
AC004943.1-202ENST00000558618 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
AC004943.1-202ENST00000558618 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
AC004943.1-202ENST00000558618 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
AC004943.1-202ENST00000558618 FOXD1Q16676 465 aa17.18■□□□□ 0.34
AC004943.1-202ENST00000558618 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
AC004943.1-202ENST00000558618 MSH5O43196 834 aa16.23■□□□□ 0.19
AC004943.1-202ENST00000558618 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
AC004943.1-202ENST00000558618 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
AC004943.1-202ENST00000558618 ADRA2BP18089 450 aa15.94■□□□□ 0.14
AC004943.1-202ENST00000558618 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
AC004943.1-202ENST00000558618 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
AC004943.1-202ENST00000558618 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
AC004943.1-202ENST00000558618 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
AC004943.1-202ENST00000558618 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
AC004943.1-202ENST00000558618 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
AC004943.1-202ENST00000558618 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
AC004943.1-202ENST00000558618 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
AC004943.1-202ENST00000558618 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
AC004943.1-202ENST00000558618 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.17
AC004943.1-202ENST00000558618 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
AC004943.1-202ENST00000558618 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
AC004943.1-202ENST00000558618 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
AC004943.1-202ENST00000558618 C1QBPQ07021 282 aaKnown RBP13.63□□□□□ -0.23
AC004943.1-202ENST00000558618 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
AC004943.1-202ENST00000558618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
AC004943.1-202ENST00000558618 KCNA4P22459 653 aa13.16□□□□□ -0.3
AC004943.1-202ENST00000558618 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
AC004943.1-202ENST00000558618 CAPN15O75808 1086 aa12.98□□□□□ -0.33
AC004943.1-202ENST00000558618 APLP2Q06481 763 aa12.91□□□□□ -0.34
AC004943.1-202ENST00000558618 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
AC004943.1-202ENST00000558618 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
AC004943.1-202ENST00000558618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
AC004943.1-202ENST00000558618 DSG3P32926 999 aa12.86□□□□□ -0.35
AC004943.1-202ENST00000558618 HNRNPUL2Q1KMD3 747 aaKnown RBP12.86□□□□□ -0.35
AC004943.1-202ENST00000558618 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
AC004943.1-202ENST00000558618 TRHP20396 242 aaPredicted RBP12.74□□□□□ -0.37
AC004943.1-202ENST00000558618 SAMD1Q6SPF0 538 aaPredicted RBP12.74□□□□□ -0.37
AC004943.1-202ENST00000558618 ABCB7O75027 752 aa12.62□□□□□ -0.39
AC004943.1-202ENST00000558618 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
AC004943.1-202ENST00000558618 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
AC004943.1-202ENST00000558618 POTEHQ6S545 545 aa12.46□□□□□ -0.41
AC004943.1-202ENST00000558618 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
AC004943.1-202ENST00000558618 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
AC004943.1-202ENST00000558618 POLA2Q14181 598 aa12.35□□□□□ -0.43
AC004943.1-202ENST00000558618 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
AC004943.1-202ENST00000558618 ATF5Q9Y2D1 282 aaPredicted RBP12.14□□□□□ -0.47
AC004943.1-202ENST00000558618 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
AC004943.1-202ENST00000558618 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
AC004943.1-202ENST00000558618 ZBTB22O15209 634 aa12.03□□□□□ -0.48
AC004943.1-202ENST00000558618 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
AC004943.1-202ENST00000558618 OSCARQ8IYS5 282 aa11.96□□□□□ -0.49
AC004943.1-202ENST00000558618 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
AC004943.1-202ENST00000558618 FBLN2P98095 1184 aa11.87□□□□□ -0.51
AC004943.1-202ENST00000558618 SPDYE2BA6NHP3 402 aa11.78□□□□□ -0.52
AC004943.1-202ENST00000558618 SPDYE6P0CI01 402 aa11.78□□□□□ -0.52
AC004943.1-202ENST00000558618 SPDYE2Q495Y8 402 aa11.78□□□□□ -0.52
AC004943.1-202ENST00000558618 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
AC004943.1-202ENST00000558618 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
AC004943.1-202ENST00000558618 FXR2P51116 673 aaKnown RBP eCLIP11.66□□□□□ -0.54
AC004943.1-202ENST00000558618 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
AC004943.1-202ENST00000558618 HAX1O00165 279 aa11.61□□□□□ -0.55
AC004943.1-202ENST00000558618 SPDYE1Q8NFV5 336 aaPredicted RBP11.61□□□□□ -0.55
AC004943.1-202ENST00000558618 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
AC004943.1-202ENST00000558618 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
AC004943.1-202ENST00000558618 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
AC004943.1-202ENST00000558618 SSUH2Q9Y2M2 353 aa11.54□□□□□ -0.56
AC004943.1-202ENST00000558618 PRKAR2AP13861 404 aaKnown RBP11.47□□□□□ -0.57
AC004943.1-202ENST00000558618 CSRNP3Q8WYN3 585 aa11.45□□□□□ -0.58
AC004943.1-202ENST00000558618 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
AC004943.1-202ENST00000558618 PRR29P0C7W0 189 aa11.38□□□□□ -0.59
AC004943.1-202ENST00000558618 EHMT2Q96KQ7 1210 aa11.32□□□□□ -0.6
AC004943.1-202ENST00000558618 EVX2Q03828 476 aa11.31□□□□□ -0.6
AC004943.1-202ENST00000558618 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
AC004943.1-202ENST00000558618 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
AC004943.1-202ENST00000558618 STAG3Q9UJ98 1225 aa11.17□□□□□ -0.62
AC004943.1-202ENST00000558618 GABBR2O75899 941 aa11.14□□□□□ -0.63
AC004943.1-202ENST00000558618 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
AC004943.1-202ENST00000558618 CD44P16070 742 aaKnown RBP11.12□□□□□ -0.63
AC004943.1-202ENST00000558618 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
AC004943.1-202ENST00000558618 CLCN6P51797 869 aa11.08□□□□□ -0.64
AC004943.1-202ENST00000558618 CREBZFQ9NS37 354 aa10.99□□□□□ -0.65
AC004943.1-202ENST00000558618 PAK3O75914 559 aaPredicted RBP10.95□□□□□ -0.66
AC004943.1-202ENST00000558618 ZRANB1Q9UGI0 708 aa10.95□□□□□ -0.66
AC004943.1-202ENST00000558618 LHX8Q68G74 356 aa10.93□□□□□ -0.66
AC004943.1-202ENST00000558618 ZNF579Q8NAF0 562 aaKnown RBP10.93□□□□□ -0.66
AC004943.1-202ENST00000558618 DCBLD2Q96PD2 775 aa10.92□□□□□ -0.66
AC004943.1-202ENST00000558618 NPM1P06748 294 aaKnown RBP eCLIP10.91□□□□□ -0.66
AC004943.1-202ENST00000558618 POTEIP0CG38 1075 aa10.83□□□□□ -0.68
AC004943.1-202ENST00000558618 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
AC004943.1-202ENST00000558618 PLEKHG5O94827 1062 aa10.76□□□□□ -0.69
AC004943.1-202ENST00000558618 PROM2Q8N271 834 aa10.76□□□□□ -0.69
AC004943.1-202ENST00000558618 MNX1P50219 401 aaPredicted RBP10.75□□□□□ -0.69
AC004943.1-202ENST00000558618 PHF12Q96QT6 1004 aa10.74□□□□□ -0.69
AC004943.1-202ENST00000558618 TSPYL2Q9H2G4 693 aaPredicted RBP10.64□□□□□ -0.71
AC004943.1-202ENST00000558618 MIER1Q8N108 512 aa10.63□□□□□ -0.71
AC004943.1-202ENST00000558618 MS4A3Q96HJ5 214 aa10.6□□□□□ -0.71
AC004943.1-202ENST00000558618 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
AC004943.1-202ENST00000558618 ASTLQ6HA08 431 aaPredicted RBP10.56□□□□□ -0.72
AC004943.1-202ENST00000558618 ZBTB47Q9UFB7 747 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms