RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 AEBP2Q6ZN18 517 aaPredicted RBP18.44■□□□□ 0.54
TRAV25-201ENST00000390454 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
TRAV25-201ENST00000390454 PHF23Q9BUL5 403 aaPredicted RBP15.81■□□□□ 0.12
TRAV25-201ENST00000390454 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
TRAV25-201ENST00000390454 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0
TRAV25-201ENST00000390454 FOXD1Q16676 465 aa14.55□□□□□ -0.08
TRAV25-201ENST00000390454 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.09
TRAV25-201ENST00000390454 KCNA4P22459 653 aa14.18□□□□□ -0.14
TRAV25-201ENST00000390454 ADRA2BP18089 450 aa13.97□□□□□ -0.17
TRAV25-201ENST00000390454 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
TRAV25-201ENST00000390454 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
TRAV25-201ENST00000390454 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
TRAV25-201ENST00000390454 POTEDQ86YR6 584 aa13.63□□□□□ -0.23
TRAV25-201ENST00000390454 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
TRAV25-201ENST00000390454 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
TRAV25-201ENST00000390454 MSH5O43196 834 aa13.45□□□□□ -0.26
TRAV25-201ENST00000390454 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
TRAV25-201ENST00000390454 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
TRAV25-201ENST00000390454 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.29
TRAV25-201ENST00000390454 RTN4Q9NQC3 1192 aaKnown RBP13.13□□□□□ -0.31
TRAV25-201ENST00000390454 NPM3O75607 178 aaKnown RBP13.1□□□□□ -0.31
TRAV25-201ENST00000390454 ZBTB22O15209 634 aa13.01□□□□□ -0.33
TRAV25-201ENST00000390454 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
TRAV25-201ENST00000390454 CNKSR2Q8WXI2 1034 aa12.81□□□□□ -0.36
TRAV25-201ENST00000390454 SCAF1Q9H7N4 1312 aaKnown RBP12.67□□□□□ -0.38
TRAV25-201ENST00000390454 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
TRAV25-201ENST00000390454 DNAJC5BQ9UF47 199 aa12.54□□□□□ -0.4
TRAV25-201ENST00000390454 FKBP8Q14318 412 aa12.5□□□□□ -0.41
TRAV25-201ENST00000390454 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
TRAV25-201ENST00000390454 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
TRAV25-201ENST00000390454 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
TRAV25-201ENST00000390454 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
TRAV25-201ENST00000390454 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
TRAV25-201ENST00000390454 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
TRAV25-201ENST00000390454 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
TRAV25-201ENST00000390454 BCANQ96GW7 911 aa12.03□□□□□ -0.48
TRAV25-201ENST00000390454 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
TRAV25-201ENST00000390454 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
TRAV25-201ENST00000390454 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
TRAV25-201ENST00000390454 FBXO3Q9UK99 471 aa11.84□□□□□ -0.51
TRAV25-201ENST00000390454 DCAF8L2P0C7V8 631 aa11.81□□□□□ -0.52
TRAV25-201ENST00000390454 DCAF8L1A6NGE4 600 aa11.8□□□□□ -0.52
TRAV25-201ENST00000390454 VSIG10Q8N0Z9 540 aa11.8□□□□□ -0.52
TRAV25-201ENST00000390454 NISCHQ9Y2I1 1504 aa11.72□□□□□ -0.53
TRAV25-201ENST00000390454 CACNB1Q02641 598 aaPredicted RBP11.7□□□□□ -0.54
TRAV25-201ENST00000390454 TPRNQ4KMQ1 711 aa11.68□□□□□ -0.54
TRAV25-201ENST00000390454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
TRAV25-201ENST00000390454 HNRNPUL2Q1KMD3 747 aaKnown RBP11.64□□□□□ -0.55
TRAV25-201ENST00000390454 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
TRAV25-201ENST00000390454 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
TRAV25-201ENST00000390454 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
TRAV25-201ENST00000390454 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.58□□□□□ -0.56
TRAV25-201ENST00000390454 RNF39Q9H2S5 420 aa11.55□□□□□ -0.56
TRAV25-201ENST00000390454 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
TRAV25-201ENST00000390454 BBXQ8WY36 941 aaPredicted RBP11.48□□□□□ -0.57
TRAV25-201ENST00000390454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRAV25-201ENST00000390454 IFNLR1Q8IU57 520 aaPredicted RBP11.46□□□□□ -0.57
TRAV25-201ENST00000390454 PKD2Q13563 968 aa11.45□□□□□ -0.58
TRAV25-201ENST00000390454 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
TRAV25-201ENST00000390454 PAXIP1Q6ZW49 1069 aaPredicted RBP11.42□□□□□ -0.58
TRAV25-201ENST00000390454 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
TRAV25-201ENST00000390454 ZNF219Q9P2Y4 722 aaPredicted RBP11.41□□□□□ -0.58
TRAV25-201ENST00000390454 FBLN2P98095 1184 aa11.39□□□□□ -0.59
TRAV25-201ENST00000390454 PROM2Q8N271 834 aa11.38□□□□□ -0.59
TRAV25-201ENST00000390454 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
TRAV25-201ENST00000390454 ERICH6Q7L0X2 663 aa11.34□□□□□ -0.59
TRAV25-201ENST00000390454 U3KPZ7 1027 aaPredicted RBP11.34□□□□□ -0.59
TRAV25-201ENST00000390454 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
TRAV25-201ENST00000390454 APLP2Q06481 763 aa11.31□□□□□ -0.6
TRAV25-201ENST00000390454 ARXQ96QS3 562 aa11.31□□□□□ -0.6
TRAV25-201ENST00000390454 TIMELESSQ9UNS1 1208 aa11.31□□□□□ -0.6
TRAV25-201ENST00000390454 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
TRAV25-201ENST00000390454 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
TRAV25-201ENST00000390454 NBR1Q14596 966 aa11.29□□□□□ -0.6
TRAV25-201ENST00000390454 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
TRAV25-201ENST00000390454 GTF3C3Q9Y5Q9 886 aa11.24□□□□□ -0.61
TRAV25-201ENST00000390454 NPM1P06748 294 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRAV25-201ENST00000390454 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
TRAV25-201ENST00000390454 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
TRAV25-201ENST00000390454 TSHZ2Q9NRE2 1034 aa11.21□□□□□ -0.61
TRAV25-201ENST00000390454 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
TRAV25-201ENST00000390454 RGL2O15211 777 aa11.08□□□□□ -0.64
TRAV25-201ENST00000390454 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
TRAV25-201ENST00000390454 HOMEZQ8IX15 550 aa11.06□□□□□ -0.64
TRAV25-201ENST00000390454 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
TRAV25-201ENST00000390454 DNAJC5Q9H3Z4 198 aa11.03□□□□□ -0.64
TRAV25-201ENST00000390454 TMEM132AQ24JP5 1023 aa11.02□□□□□ -0.65
TRAV25-201ENST00000390454 PLCD3Q8N3E9 789 aa10.98□□□□□ -0.65
TRAV25-201ENST00000390454 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
TRAV25-201ENST00000390454 CAPN15O75808 1086 aa10.97□□□□□ -0.65
TRAV25-201ENST00000390454 C14orf37Q86TY3 774 aa10.96□□□□□ -0.65
TRAV25-201ENST00000390454 DSG3P32926 999 aa10.91□□□□□ -0.66
TRAV25-201ENST00000390454 CIZ1Q9ULV3 898 aaPredicted RBP10.9□□□□□ -0.66
TRAV25-201ENST00000390454 POLA2Q14181 598 aa10.89□□□□□ -0.67
TRAV25-201ENST00000390454 TRHP20396 242 aaPredicted RBP10.87□□□□□ -0.67
TRAV25-201ENST00000390454 HS6ST3Q8IZP7 471 aa10.86□□□□□ -0.67
TRAV25-201ENST00000390454 TRIM41Q8WV44 630 aa10.86□□□□□ -0.67
TRAV25-201ENST00000390454 ZBTB12Q9Y330 459 aaPredicted RBP10.86□□□□□ -0.67
TRAV25-201ENST00000390454 MIER1Q8N108 512 aa10.85□□□□□ -0.67
TRAV25-201ENST00000390454 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms