RNA–Protein interactions for RNA: ENST00000411383.1

RN7SKP279-201, Transcript of RNA, 7SK small nuclear pseudogene 279, humanhuman

BASIC

Gene RN7SKP279, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP279-201ENST00000411383 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
RN7SKP279-201ENST00000411383 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
RN7SKP279-201ENST00000411383 SENP3Q9H4L4 574 aaPredicted RBP20.24■□□□□ 0.83
RN7SKP279-201ENST00000411383 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
RN7SKP279-201ENST00000411383 FOXD1Q16676 465 aa18.91■□□□□ 0.62
RN7SKP279-201ENST00000411383 POTEDQ86YR6 584 aa18.87■□□□□ 0.61
RN7SKP279-201ENST00000411383 MSH5O43196 834 aa18.05■□□□□ 0.48
RN7SKP279-201ENST00000411383 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
RN7SKP279-201ENST00000411383 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
RN7SKP279-201ENST00000411383 ADRA2BP18089 450 aa16.99■□□□□ 0.31
RN7SKP279-201ENST00000411383 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
RN7SKP279-201ENST00000411383 CACNB1Q02641 598 aaPredicted RBP15.97■□□□□ 0.15
RN7SKP279-201ENST00000411383 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
RN7SKP279-201ENST00000411383 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
RN7SKP279-201ENST00000411383 SCAF1Q9H7N4 1312 aaKnown RBP15.63■□□□□ 0.09
RN7SKP279-201ENST00000411383 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
RN7SKP279-201ENST00000411383 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
RN7SKP279-201ENST00000411383 C1QBPQ07021 282 aaKnown RBP15.05■□□□□ -0
RN7SKP279-201ENST00000411383 HOXD11P31277 338 aaPredicted RBP15□□□□□ -0.01
RN7SKP279-201ENST00000411383 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
RN7SKP279-201ENST00000411383 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
RN7SKP279-201ENST00000411383 POTEHQ6S545 545 aa14.66□□□□□ -0.06
RN7SKP279-201ENST00000411383 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
RN7SKP279-201ENST00000411383 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
RN7SKP279-201ENST00000411383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.11
RN7SKP279-201ENST00000411383 DSG3P32926 999 aa14.06□□□□□ -0.16
RN7SKP279-201ENST00000411383 CAPN15O75808 1086 aa14.01□□□□□ -0.17
RN7SKP279-201ENST00000411383 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
RN7SKP279-201ENST00000411383 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
RN7SKP279-201ENST00000411383 U3KPZ7 1027 aaPredicted RBP13.91□□□□□ -0.18
RN7SKP279-201ENST00000411383 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
RN7SKP279-201ENST00000411383 ABCB7O75027 752 aa13.6□□□□□ -0.23
RN7SKP279-201ENST00000411383 TRHP20396 242 aaPredicted RBP13.59□□□□□ -0.23
RN7SKP279-201ENST00000411383 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
RN7SKP279-201ENST00000411383 APLP2Q06481 763 aa13.54□□□□□ -0.24
RN7SKP279-201ENST00000411383 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
RN7SKP279-201ENST00000411383 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
RN7SKP279-201ENST00000411383 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
RN7SKP279-201ENST00000411383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
RN7SKP279-201ENST00000411383 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
RN7SKP279-201ENST00000411383 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
RN7SKP279-201ENST00000411383 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
RN7SKP279-201ENST00000411383 POLA2Q14181 598 aa13.03□□□□□ -0.32
RN7SKP279-201ENST00000411383 AKT1S1Q96B36 256 aa13□□□□□ -0.33
RN7SKP279-201ENST00000411383 HAX1O00165 279 aa12.99□□□□□ -0.33
RN7SKP279-201ENST00000411383 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
RN7SKP279-201ENST00000411383 NISCHQ9Y2I1 1504 aa12.91□□□□□ -0.34
RN7SKP279-201ENST00000411383 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP279-201ENST00000411383 KCNA4P22459 653 aa12.77□□□□□ -0.37
RN7SKP279-201ENST00000411383 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
RN7SKP279-201ENST00000411383 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
RN7SKP279-201ENST00000411383 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
RN7SKP279-201ENST00000411383 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
RN7SKP279-201ENST00000411383 EVX2Q03828 476 aa12.68□□□□□ -0.38
RN7SKP279-201ENST00000411383 ABCC9O60706 1549 aa12.67□□□□□ -0.38
RN7SKP279-201ENST00000411383 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
RN7SKP279-201ENST00000411383 LHX8Q68G74 356 aa12.55□□□□□ -0.4
RN7SKP279-201ENST00000411383 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
RN7SKP279-201ENST00000411383 PLSCR2Q9NRY7 297 aa12.43□□□□□ -0.42
RN7SKP279-201ENST00000411383 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
RN7SKP279-201ENST00000411383 C19orf67A6NJJ6 358 aa12.39□□□□□ -0.43
RN7SKP279-201ENST00000411383 GABBR2O75899 941 aa12.39□□□□□ -0.43
RN7SKP279-201ENST00000411383 CLEC11AQ9Y240 323 aa12.28□□□□□ -0.44
RN7SKP279-201ENST00000411383 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.45
RN7SKP279-201ENST00000411383 SPDYE6P0CI01 402 aa12.27□□□□□ -0.45
RN7SKP279-201ENST00000411383 SPDYE2Q495Y8 402 aa12.27□□□□□ -0.45
RN7SKP279-201ENST00000411383 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
RN7SKP279-201ENST00000411383 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
RN7SKP279-201ENST00000411383 DNAJC5Q9H3Z4 198 aa12.15□□□□□ -0.46
RN7SKP279-201ENST00000411383 FBLN2P98095 1184 aa12.12□□□□□ -0.47
RN7SKP279-201ENST00000411383 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
RN7SKP279-201ENST00000411383 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
RN7SKP279-201ENST00000411383 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
RN7SKP279-201ENST00000411383 SSUH2Q9Y2M2 353 aa11.99□□□□□ -0.49
RN7SKP279-201ENST00000411383 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
RN7SKP279-201ENST00000411383 CLCN6P51797 869 aa11.98□□□□□ -0.49
RN7SKP279-201ENST00000411383 PRR29P0C7W0 189 aa11.96□□□□□ -0.49
RN7SKP279-201ENST00000411383 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
RN7SKP279-201ENST00000411383 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
RN7SKP279-201ENST00000411383 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
RN7SKP279-201ENST00000411383 POTEMA6NI47 508 aa11.87□□□□□ -0.51
RN7SKP279-201ENST00000411383 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP279-201ENST00000411383 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP279-201ENST00000411383 OTUD5Q96G74 571 aa11.81□□□□□ -0.52
RN7SKP279-201ENST00000411383 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
RN7SKP279-201ENST00000411383 PABPN1Q86U42 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
RN7SKP279-201ENST00000411383 CCDC180Q9P1Z9 1646 aa11.75□□□□□ -0.53
RN7SKP279-201ENST00000411383 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
RN7SKP279-201ENST00000411383 PCDH10Q9P2E7 1040 aa11.73□□□□□ -0.53
RN7SKP279-201ENST00000411383 ZBTB22O15209 634 aa11.7□□□□□ -0.54
RN7SKP279-201ENST00000411383 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
RN7SKP279-201ENST00000411383 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
RN7SKP279-201ENST00000411383 RB1CC1Q8TDY2 1594 aa11.66□□□□□ -0.54
RN7SKP279-201ENST00000411383 GALR2O43603 387 aaPredicted RBP11.64□□□□□ -0.55
RN7SKP279-201ENST00000411383 CECR2Q9BXF3 1484 aa11.5□□□□□ -0.57
RN7SKP279-201ENST00000411383 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
RN7SKP279-201ENST00000411383 PELP1Q8IZL8 1130 aaKnown RBP11.46□□□□□ -0.57
RN7SKP279-201ENST00000411383 MAMSTRQ6ZN01 415 aa11.45□□□□□ -0.58
RN7SKP279-201ENST00000411383 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
RN7SKP279-201ENST00000411383 CREBZFQ9NS37 354 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 230.7 ms