RNA–Protein interactions for RNA: ENST00000368916.1

GABPB2-201, Transcript of GA binding protein transcription factor subunit beta 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GABPB2, Length 1,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB2-201ENST00000368916 AEBP2Q6ZN18 517 aaPredicted RBP21.91■■□□□ 1.1
GABPB2-201ENST00000368916 POTEDQ86YR6 584 aa20.8■□□□□ 0.92
GABPB2-201ENST00000368916 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
GABPB2-201ENST00000368916 SENP3Q9H4L4 574 aaPredicted RBP19.21■□□□□ 0.67
GABPB2-201ENST00000368916 PHF23Q9BUL5 403 aaPredicted RBP18.54■□□□□ 0.56
GABPB2-201ENST00000368916 FOXD1Q16676 465 aa18.02■□□□□ 0.47
GABPB2-201ENST00000368916 MSH5O43196 834 aa17.83■□□□□ 0.45
GABPB2-201ENST00000368916 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
GABPB2-201ENST00000368916 PIAS4Q8N2W9 510 aaPredicted RBP16.38■□□□□ 0.21
GABPB2-201ENST00000368916 POTEHQ6S545 545 aa15.91■□□□□ 0.14
GABPB2-201ENST00000368916 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
GABPB2-201ENST00000368916 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
GABPB2-201ENST00000368916 ADRA2BP18089 450 aa15.23■□□□□ 0.03
GABPB2-201ENST00000368916 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
GABPB2-201ENST00000368916 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
GABPB2-201ENST00000368916 C1QBPQ07021 282 aaKnown RBP14.67□□□□□ -0.06
GABPB2-201ENST00000368916 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
GABPB2-201ENST00000368916 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
GABPB2-201ENST00000368916 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
GABPB2-201ENST00000368916 PLSCR2Q9NRY7 297 aa14.01□□□□□ -0.17
GABPB2-201ENST00000368916 SP7Q8TDD2 431 aaPredicted RBP13.97□□□□□ -0.17
GABPB2-201ENST00000368916 NISCHQ9Y2I1 1504 aa13.89□□□□□ -0.19
GABPB2-201ENST00000368916 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
GABPB2-201ENST00000368916 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
GABPB2-201ENST00000368916 PPP4R3CPQ6ZMV5 832 aa13.43□□□□□ -0.26
GABPB2-201ENST00000368916 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
GABPB2-201ENST00000368916 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
GABPB2-201ENST00000368916 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
GABPB2-201ENST00000368916 DSG3P32926 999 aa13.26□□□□□ -0.29
GABPB2-201ENST00000368916 LHX8Q68G74 356 aa13.05□□□□□ -0.32
GABPB2-201ENST00000368916 KCNA4P22459 653 aa12.96□□□□□ -0.33
GABPB2-201ENST00000368916 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
GABPB2-201ENST00000368916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.34
GABPB2-201ENST00000368916 RBM42Q9BTD8 480 aaKnown RBP12.86□□□□□ -0.35
GABPB2-201ENST00000368916 CAPN15O75808 1086 aa12.84□□□□□ -0.35
GABPB2-201ENST00000368916 HAX1O00165 279 aa12.82□□□□□ -0.36
GABPB2-201ENST00000368916 NPM3O75607 178 aaKnown RBP12.69□□□□□ -0.38
GABPB2-201ENST00000368916 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
GABPB2-201ENST00000368916 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.4
GABPB2-201ENST00000368916 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
GABPB2-201ENST00000368916 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
GABPB2-201ENST00000368916 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.41
GABPB2-201ENST00000368916 HRCP23327 699 aa12.42□□□□□ -0.42
GABPB2-201ENST00000368916 POTEMA6NI47 508 aa12.4□□□□□ -0.42
GABPB2-201ENST00000368916 EVX2Q03828 476 aa12.38□□□□□ -0.43
GABPB2-201ENST00000368916 APLP2Q06481 763 aa12.38□□□□□ -0.43
GABPB2-201ENST00000368916 SLC4A1APQ9BWU0 796 aaKnown RBP12.3□□□□□ -0.44
GABPB2-201ENST00000368916 ABCB7O75027 752 aa12.29□□□□□ -0.44
GABPB2-201ENST00000368916 POTEGQ6S5H5 508 aa12.28□□□□□ -0.44
GABPB2-201ENST00000368916 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
GABPB2-201ENST00000368916 MYT1Q01538 1121 aa12.22□□□□□ -0.45
GABPB2-201ENST00000368916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
GABPB2-201ENST00000368916 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
GABPB2-201ENST00000368916 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
GABPB2-201ENST00000368916 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
GABPB2-201ENST00000368916 GABBR2O75899 941 aa12.1□□□□□ -0.47
GABPB2-201ENST00000368916 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
GABPB2-201ENST00000368916 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
GABPB2-201ENST00000368916 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
GABPB2-201ENST00000368916 AKT1S1Q96B36 256 aa12.06□□□□□ -0.48
GABPB2-201ENST00000368916 DCAF1Q9Y4B6 1507 aa12.05□□□□□ -0.48
GABPB2-201ENST00000368916 ZEB1P37275 1124 aaPredicted RBP12.03□□□□□ -0.48
GABPB2-201ENST00000368916 ZBTB22O15209 634 aa11.95□□□□□ -0.5
GABPB2-201ENST00000368916 PCGF6Q9BYE7 350 aa11.94□□□□□ -0.5
GABPB2-201ENST00000368916 SUPT5HO00267 1087 aaKnown RBP11.89□□□□□ -0.51
GABPB2-201ENST00000368916 CCDC180Q9P1Z9 1646 aa11.88□□□□□ -0.51
GABPB2-201ENST00000368916 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
GABPB2-201ENST00000368916 TRIM26Q12899 539 aaPredicted RBP11.85□□□□□ -0.51
GABPB2-201ENST00000368916 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
GABPB2-201ENST00000368916 FOXD4L1Q9NU39 408 aa11.85□□□□□ -0.51
GABPB2-201ENST00000368916 ZCCHC6Q5VYS8 1495 aaKnown RBP11.85□□□□□ -0.51
GABPB2-201ENST00000368916 C19orf67A6NJJ6 358 aa11.81□□□□□ -0.52
GABPB2-201ENST00000368916 MYO15BQ96JP2 1530 aa11.8□□□□□ -0.52
GABPB2-201ENST00000368916 SHROOM4Q9ULL8 1493 aa11.79□□□□□ -0.52
GABPB2-201ENST00000368916 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
GABPB2-201ENST00000368916 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
GABPB2-201ENST00000368916 OTUD5Q96G74 571 aa11.75□□□□□ -0.53
GABPB2-201ENST00000368916 POLA2Q14181 598 aa11.75□□□□□ -0.53
GABPB2-201ENST00000368916 MYCNP04198 464 aaPredicted RBP11.74□□□□□ -0.53
GABPB2-201ENST00000368916 PPARGC1BQ86YN6 1023 aaKnown RBP11.71□□□□□ -0.53
GABPB2-201ENST00000368916 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
GABPB2-201ENST00000368916 TTBK1Q5TCY1 1321 aaPredicted RBP11.54□□□□□ -0.56
GABPB2-201ENST00000368916 CENPBP07199 599 aaPredicted RBP11.53□□□□□ -0.56
GABPB2-201ENST00000368916 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
GABPB2-201ENST00000368916 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
GABPB2-201ENST00000368916 PRKAR2AP13861 404 aaKnown RBP11.44□□□□□ -0.58
GABPB2-201ENST00000368916 CLCN6P51797 869 aa11.41□□□□□ -0.58
GABPB2-201ENST00000368916 LOC105371045A0A1W2PR82 267 aa11.4□□□□□ -0.58
GABPB2-201ENST00000368916 LCE2DQ5TA82 110 aaPredicted RBP11.4□□□□□ -0.59
GABPB2-201ENST00000368916 DCBLD2Q96PD2 775 aa11.39□□□□□ -0.59
GABPB2-201ENST00000368916 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
GABPB2-201ENST00000368916 ATXN8OSP0DMR3 200 aa11.35□□□□□ -0.59
GABPB2-201ENST00000368916 CDAN1Q8IWY9 1227 aa11.33□□□□□ -0.6
GABPB2-201ENST00000368916 CLSPNQ9HAW4 1339 aa11.32□□□□□ -0.6
GABPB2-201ENST00000368916 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
GABPB2-201ENST00000368916 MMRN1Q13201 1228 aa11.3□□□□□ -0.6
GABPB2-201ENST00000368916 GTF3C3Q9Y5Q9 886 aa11.27□□□□□ -0.61
GABPB2-201ENST00000368916 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
GABPB2-201ENST00000368916 ABCC9O60706 1549 aa11.25□□□□□ -0.61
GABPB2-201ENST00000368916 DIEXFQ68CQ4 756 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms