RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
HMGB1P45-201ENST00000435986 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
HMGB1P45-201ENST00000435986 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
HMGB1P45-201ENST00000435986 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
HMGB1P45-201ENST00000435986 FOXD1Q16676 465 aa16.64■□□□□ 0.25
HMGB1P45-201ENST00000435986 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
HMGB1P45-201ENST00000435986 PPP6R1Q9UPN7 881 aa15.83■□□□□ 0.12
HMGB1P45-201ENST00000435986 ADRA2BP18089 450 aa15.75■□□□□ 0.11
HMGB1P45-201ENST00000435986 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
HMGB1P45-201ENST00000435986 MSH5O43196 834 aa15.3■□□□□ 0.04
HMGB1P45-201ENST00000435986 POTEDQ86YR6 584 aa14.7□□□□□ -0.06
HMGB1P45-201ENST00000435986 MAPK8IP2Q13387 824 aaPredicted RBP14.44□□□□□ -0.1
HMGB1P45-201ENST00000435986 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
HMGB1P45-201ENST00000435986 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
HMGB1P45-201ENST00000435986 DMRT2Q9Y5R5 561 aa14.14□□□□□ -0.15
HMGB1P45-201ENST00000435986 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
HMGB1P45-201ENST00000435986 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
HMGB1P45-201ENST00000435986 KCNA4P22459 653 aa13.79□□□□□ -0.2
HMGB1P45-201ENST00000435986 HOXD11P31277 338 aaPredicted RBP13.78□□□□□ -0.2
HMGB1P45-201ENST00000435986 RNF216Q9NWF9 866 aaPredicted RBP13.75□□□□□ -0.21
HMGB1P45-201ENST00000435986 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
HMGB1P45-201ENST00000435986 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
HMGB1P45-201ENST00000435986 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
HMGB1P45-201ENST00000435986 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
HMGB1P45-201ENST00000435986 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
HMGB1P45-201ENST00000435986 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
HMGB1P45-201ENST00000435986 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
HMGB1P45-201ENST00000435986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.32
HMGB1P45-201ENST00000435986 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
HMGB1P45-201ENST00000435986 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
HMGB1P45-201ENST00000435986 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
HMGB1P45-201ENST00000435986 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
HMGB1P45-201ENST00000435986 FOXD4L1Q9NU39 408 aa12.74□□□□□ -0.37
HMGB1P45-201ENST00000435986 ZBTB22O15209 634 aa12.73□□□□□ -0.37
HMGB1P45-201ENST00000435986 SPINK5Q9NQ38 1064 aaPredicted RBP12.67□□□□□ -0.38
HMGB1P45-201ENST00000435986 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
HMGB1P45-201ENST00000435986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
HMGB1P45-201ENST00000435986 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
HMGB1P45-201ENST00000435986 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
HMGB1P45-201ENST00000435986 CAPN15O75808 1086 aa12.53□□□□□ -0.4
HMGB1P45-201ENST00000435986 APLP2Q06481 763 aa12.49□□□□□ -0.41
HMGB1P45-201ENST00000435986 DSG3P32926 999 aa12.45□□□□□ -0.42
HMGB1P45-201ENST00000435986 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
HMGB1P45-201ENST00000435986 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
HMGB1P45-201ENST00000435986 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
HMGB1P45-201ENST00000435986 ABCB7O75027 752 aa12.34□□□□□ -0.43
HMGB1P45-201ENST00000435986 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
HMGB1P45-201ENST00000435986 POLA2Q14181 598 aa12.15□□□□□ -0.46
HMGB1P45-201ENST00000435986 ZBTB12Q9Y330 459 aaPredicted RBP11.92□□□□□ -0.5
HMGB1P45-201ENST00000435986 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
HMGB1P45-201ENST00000435986 FBLN2P98095 1184 aa11.78□□□□□ -0.52
HMGB1P45-201ENST00000435986 OSCARQ8IYS5 282 aa11.77□□□□□ -0.53
HMGB1P45-201ENST00000435986 RBM42Q9BTD8 480 aaKnown RBP11.75□□□□□ -0.53
HMGB1P45-201ENST00000435986 FKBP8Q14318 412 aa11.7□□□□□ -0.54
HMGB1P45-201ENST00000435986 SPDYE2BA6NHP3 402 aa11.61□□□□□ -0.55
HMGB1P45-201ENST00000435986 SPDYE6P0CI01 402 aa11.61□□□□□ -0.55
HMGB1P45-201ENST00000435986 SPDYE2Q495Y8 402 aa11.61□□□□□ -0.55
HMGB1P45-201ENST00000435986 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
HMGB1P45-201ENST00000435986 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
HMGB1P45-201ENST00000435986 SSUH2Q9Y2M2 353 aa11.54□□□□□ -0.56
HMGB1P45-201ENST00000435986 POTEHQ6S545 545 aa11.53□□□□□ -0.56
HMGB1P45-201ENST00000435986 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
HMGB1P45-201ENST00000435986 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
HMGB1P45-201ENST00000435986 CHRDL2Q6WN34 429 aa11.48□□□□□ -0.57
HMGB1P45-201ENST00000435986 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
HMGB1P45-201ENST00000435986 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
HMGB1P45-201ENST00000435986 RTN4Q9NQC3 1192 aaKnown RBP11.38□□□□□ -0.59
HMGB1P45-201ENST00000435986 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
HMGB1P45-201ENST00000435986 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
HMGB1P45-201ENST00000435986 PIP4P2Q8N4L2 257 aa11.3□□□□□ -0.6
HMGB1P45-201ENST00000435986 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
HMGB1P45-201ENST00000435986 PROM2Q8N271 834 aa11.28□□□□□ -0.6
HMGB1P45-201ENST00000435986 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
HMGB1P45-201ENST00000435986 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
HMGB1P45-201ENST00000435986 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
HMGB1P45-201ENST00000435986 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
HMGB1P45-201ENST00000435986 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
HMGB1P45-201ENST00000435986 PRKAR2AP13861 404 aaKnown RBP11.1□□□□□ -0.63
HMGB1P45-201ENST00000435986 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
HMGB1P45-201ENST00000435986 EVX2Q03828 476 aa11.04□□□□□ -0.64
HMGB1P45-201ENST00000435986 HAX1O00165 279 aa11□□□□□ -0.65
HMGB1P45-201ENST00000435986 VASPP50552 380 aaPredicted RBP11□□□□□ -0.65
HMGB1P45-201ENST00000435986 CREBZFQ9NS37 354 aa10.98□□□□□ -0.65
HMGB1P45-201ENST00000435986 SP7Q8TDD2 431 aaPredicted RBP10.89□□□□□ -0.67
HMGB1P45-201ENST00000435986 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
HMGB1P45-201ENST00000435986 MNX1P50219 401 aaPredicted RBP10.87□□□□□ -0.67
HMGB1P45-201ENST00000435986 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
HMGB1P45-201ENST00000435986 IFNLR1Q8IU57 520 aaPredicted RBP10.81□□□□□ -0.68
HMGB1P45-201ENST00000435986 KLHL34Q8N239 644 aa10.81□□□□□ -0.68
HMGB1P45-201ENST00000435986 MIER1Q8N108 512 aa10.8□□□□□ -0.68
HMGB1P45-201ENST00000435986 PLEKHG5O94827 1062 aa10.77□□□□□ -0.69
HMGB1P45-201ENST00000435986 DCAF8L2P0C7V8 631 aa10.76□□□□□ -0.69
HMGB1P45-201ENST00000435986 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
HMGB1P45-201ENST00000435986 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
HMGB1P45-201ENST00000435986 SPOCK2Q92563 424 aa10.74□□□□□ -0.69
HMGB1P45-201ENST00000435986 NPM1P06748 294 aaKnown RBP eCLIP10.72□□□□□ -0.69
HMGB1P45-201ENST00000435986 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
HMGB1P45-201ENST00000435986 GABBR2O75899 941 aa10.68□□□□□ -0.7
HMGB1P45-201ENST00000435986 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
HMGB1P45-201ENST00000435986 NUBP1P53384 320 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms