Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC093799.1-201ENST00000452411 499 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.09□□□□□ -1.27
PDGFAP04085 RPL30P9-201ENST00000465586 330 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AC090013.1-201ENST00000485147 480 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 IGKV3D-31-201ENST00000519131 281 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC7.09□□□□□ -1.27
PDGFAP04085 OR4C1P-201ENST00000530880 937 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 RPL3P13-201ENST00000550415 216 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.09□□□□□ -1.27
PDGFAP04085 PSMB7P1-201ENST00000556349 514 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.09□□□□□ -1.27
PDGFAP04085 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.09□□□□□ -1.27
PDGFAP04085 ARGFXP2-201ENST00000579304 949 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC7.09□□□□□ -1.27
PDGFAP04085 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC7.09□□□□□ -1.27
PDGFAP04085 AC020914.6-201ENST00000594327 272 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AL390058.1-201ENST00000603834 629 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AC108451.2-201ENST00000603875 538 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AP000860.1-201ENST00000605250 559 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC7.09□□□□□ -1.27
PDGFAP04085 AL135999.3-201ENST00000610501 812 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AL139123.1-201ENST00000612008 430 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AC063943.3-201ENST00000615562 356 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.09□□□□□ -1.27
PDGFAP04085 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AL450226.2-201ENST00000622913 439 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AC026336.5-201ENST00000624455 738 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.09□□□□□ -1.27
PDGFAP04085 VEZF1P1-201ENST00000423931 1541 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.09□□□□□ -1.27
PDGFAP04085 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PDGFAP04085 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.09□□□□□ -1.27
PDGFAP04085 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDGFAP04085 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDGFAP04085 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
PDGFAP04085 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AC110716.2-201ENST00000563865 3945 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 DDX50P1-201ENST00000438163 2400 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AC245100.2-201ENST00000454544 1679 ntBASIC7.09□□□□□ -1.27
PDGFAP04085 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.09□□□□□ -1.27
PDGFAP04085 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.09□□□□□ -1.28
PDGFAP04085 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC7.09□□□□□ -1.28
PDGFAP04085 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
PDGFAP04085 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
PDGFAP04085 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
PDGFAP04085 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
PDGFAP04085 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.08□□□□□ -1.28
PDGFAP04085 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 SOCS5P5-201ENST00000402732 1586 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.08□□□□□ -1.28
PDGFAP04085 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.08□□□□□ -1.28
PDGFAP04085 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.08□□□□□ -1.28
PDGFAP04085 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.08□□□□□ -1.28
PDGFAP04085 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PDGFAP04085 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PDGFAP04085 RNU6-839P-201ENST00000363347 108 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 Y_RNA.554-201ENST00000384672 102 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PDGFAP04085 AC113608.1-201ENST00000398740 305 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 SOD1P1-201ENST00000407803 440 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC7.08□□□□□ -1.28
PDGFAP04085 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC7.08□□□□□ -1.28
PDGFAP04085 RPLP1P10-201ENST00000413972 339 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 NPM1P4-201ENST00000414095 812 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 AC023141.10-201ENST00000415634 200 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 AC114814.2-201ENST00000419195 485 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.08□□□□□ -1.28
PDGFAP04085 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.08□□□□□ -1.28
PDGFAP04085 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.08□□□□□ -1.28
PDGFAP04085 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC7.08□□□□□ -1.28
PDGFAP04085 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 AC000111.3-201ENST00000433478 193 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 PHB2P1-201ENST00000434943 890 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.08□□□□□ -1.28
PDGFAP04085 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.08□□□□□ -1.28
PDGFAP04085 AL592114.2-201ENST00000440142 532 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 TRIM60P16-201ENST00000444048 694 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 MRPS21P1-201ENST00000453850 223 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 DNAJB5P1-201ENST00000454004 806 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 RPSAP24-201ENST00000461543 873 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 HMGB1P36-201ENST00000487709 576 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.08□□□□□ -1.28
PDGFAP04085 AL445187.1-201ENST00000502685 260 ntBASIC7.08□□□□□ -1.28
PDGFAP04085 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.08□□□□□ -1.28
PDGFAP04085 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.08□□□□□ -1.28
PDGFAP04085 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.08□□□□□ -1.28
PDGFAP04085 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.08□□□□□ -1.28
PDGFAP04085 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.08□□□□□ -1.28
PDGFAP04085 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PDGFAP04085 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.08□□□□□ -1.28
PDGFAP04085 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms