RNA–Protein interactions for RNA: ENST00000523862.5

AP003548.1-201, humanhuman

TSL 3 BASIC

Gene AP003548.1, Length 711 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003548.1-201ENST00000523862 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
AP003548.1-201ENST00000523862 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
AP003548.1-201ENST00000523862 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
AP003548.1-201ENST00000523862 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
AP003548.1-201ENST00000523862 FOXD1Q16676 465 aa17.49■□□□□ 0.39
AP003548.1-201ENST00000523862 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
AP003548.1-201ENST00000523862 ADRA2BP18089 450 aa16.72■□□□□ 0.27
AP003548.1-201ENST00000523862 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
AP003548.1-201ENST00000523862 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
AP003548.1-201ENST00000523862 MSH5O43196 834 aa16.16■□□□□ 0.18
AP003548.1-201ENST00000523862 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
AP003548.1-201ENST00000523862 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
AP003548.1-201ENST00000523862 MAPK8IP2Q13387 824 aaPredicted RBP15.24■□□□□ 0.03
AP003548.1-201ENST00000523862 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
AP003548.1-201ENST00000523862 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
AP003548.1-201ENST00000523862 DMRT2Q9Y5R5 561 aa14.96□□□□□ -0.01
AP003548.1-201ENST00000523862 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
AP003548.1-201ENST00000523862 NCBP3Q53F19 620 aaKnown RBP14.78□□□□□ -0.04
AP003548.1-201ENST00000523862 KCNA4P22459 653 aa14.7□□□□□ -0.06
AP003548.1-201ENST00000523862 ABCC9O60706 1549 aa14.69□□□□□ -0.06
AP003548.1-201ENST00000523862 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
AP003548.1-201ENST00000523862 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
AP003548.1-201ENST00000523862 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
AP003548.1-201ENST00000523862 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
AP003548.1-201ENST00000523862 DCAF8L1A6NGE4 600 aa14.48□□□□□ -0.09
AP003548.1-201ENST00000523862 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
AP003548.1-201ENST00000523862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.17
AP003548.1-201ENST00000523862 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
AP003548.1-201ENST00000523862 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
AP003548.1-201ENST00000523862 RNF39Q9H2S5 420 aa13.84□□□□□ -0.19
AP003548.1-201ENST00000523862 SLC4A2P04920 1241 aa13.8□□□□□ -0.2
AP003548.1-201ENST00000523862 NACADO15069 1562 aa13.75□□□□□ -0.21
AP003548.1-201ENST00000523862 UNC13AQ9UPW8 1703 aa13.73□□□□□ -0.21
AP003548.1-201ENST00000523862 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
AP003548.1-201ENST00000523862 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
AP003548.1-201ENST00000523862 C1QBPQ07021 282 aaKnown RBP13.65□□□□□ -0.22
AP003548.1-201ENST00000523862 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
AP003548.1-201ENST00000523862 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
AP003548.1-201ENST00000523862 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
AP003548.1-201ENST00000523862 ZBTB22O15209 634 aa13.51□□□□□ -0.25
AP003548.1-201ENST00000523862 MYO15BQ96JP2 1530 aa13.48□□□□□ -0.25
AP003548.1-201ENST00000523862 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
AP003548.1-201ENST00000523862 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
AP003548.1-201ENST00000523862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
AP003548.1-201ENST00000523862 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
AP003548.1-201ENST00000523862 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
AP003548.1-201ENST00000523862 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
AP003548.1-201ENST00000523862 CAPN15O75808 1086 aa13.37□□□□□ -0.27
AP003548.1-201ENST00000523862 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
AP003548.1-201ENST00000523862 CC2D2AQ9P2K1 1620 aa13.34□□□□□ -0.27
AP003548.1-201ENST00000523862 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
AP003548.1-201ENST00000523862 CECR2Q9BXF3 1484 aa13.3□□□□□ -0.28
AP003548.1-201ENST00000523862 APLP2Q06481 763 aa13.3□□□□□ -0.28
AP003548.1-201ENST00000523862 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
AP003548.1-201ENST00000523862 TRHP20396 242 aaPredicted RBP13.28□□□□□ -0.28
AP003548.1-201ENST00000523862 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
AP003548.1-201ENST00000523862 EIF4G1Q04637 1599 aaKnown RBP13.22□□□□□ -0.29
AP003548.1-201ENST00000523862 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
AP003548.1-201ENST00000523862 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
AP003548.1-201ENST00000523862 DCAF1Q9Y4B6 1507 aa13.15□□□□□ -0.3
AP003548.1-201ENST00000523862 ABCB7O75027 752 aa13.12□□□□□ -0.31
AP003548.1-201ENST00000523862 DSG3P32926 999 aa13.12□□□□□ -0.31
AP003548.1-201ENST00000523862 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
AP003548.1-201ENST00000523862 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
AP003548.1-201ENST00000523862 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
AP003548.1-201ENST00000523862 POLA2Q14181 598 aa12.98□□□□□ -0.33
AP003548.1-201ENST00000523862 CUX2O14529 1486 aa12.91□□□□□ -0.34
AP003548.1-201ENST00000523862 ERCC6Q03468 1493 aa12.7□□□□□ -0.38
AP003548.1-201ENST00000523862 NCAPD3P42695 1498 aa12.67□□□□□ -0.38
AP003548.1-201ENST00000523862 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
AP003548.1-201ENST00000523862 FBLN2P98095 1184 aa12.6□□□□□ -0.39
AP003548.1-201ENST00000523862 THOC2Q8NI27 1593 aaKnown RBP12.59□□□□□ -0.39
AP003548.1-201ENST00000523862 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
AP003548.1-201ENST00000523862 MKRN4PQ13434 485 aaPredicted RBP12.55□□□□□ -0.4
AP003548.1-201ENST00000523862 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
AP003548.1-201ENST00000523862 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
AP003548.1-201ENST00000523862 NESP48681 1621 aa12.54□□□□□ -0.4
AP003548.1-201ENST00000523862 SMARCA2P51531 1590 aa12.52□□□□□ -0.4
AP003548.1-201ENST00000523862 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
AP003548.1-201ENST00000523862 SMARCA4P51532 1647 aa12.48□□□□□ -0.41
AP003548.1-201ENST00000523862 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
AP003548.1-201ENST00000523862 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
AP003548.1-201ENST00000523862 PEG3Q9GZU2 1588 aa12.42□□□□□ -0.42
AP003548.1-201ENST00000523862 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
AP003548.1-201ENST00000523862 BAZ1BQ9UIG0 1483 aaKnown RBP12.38□□□□□ -0.43
AP003548.1-201ENST00000523862 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
AP003548.1-201ENST00000523862 SPDYE2BA6NHP3 402 aa12.33□□□□□ -0.44
AP003548.1-201ENST00000523862 SPDYE6P0CI01 402 aa12.33□□□□□ -0.44
AP003548.1-201ENST00000523862 SPDYE2Q495Y8 402 aa12.33□□□□□ -0.44
AP003548.1-201ENST00000523862 PDS5BQ9NTI5 1447 aa12.33□□□□□ -0.44
AP003548.1-201ENST00000523862 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
AP003548.1-201ENST00000523862 WDR62O43379 1518 aa12.31□□□□□ -0.44
AP003548.1-201ENST00000523862 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
AP003548.1-201ENST00000523862 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.45
AP003548.1-201ENST00000523862 REM2Q8IYK8 340 aaPredicted RBP12.22□□□□□ -0.45
AP003548.1-201ENST00000523862 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.45
AP003548.1-201ENST00000523862 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
AP003548.1-201ENST00000523862 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
AP003548.1-201ENST00000523862 MROH2BQ7Z745 1585 aa12.18□□□□□ -0.46
AP003548.1-201ENST00000523862 RIMBP3CA6NJZ7 1639 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms