RNA–Protein interactions for RNA: ENST00000615562.1

AC063943.3-201, humanhuman

BASIC

Gene AC063943.3, Length 356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC063943.3-201ENST00000615562 AEBP2Q6ZN18 517 aaPredicted RBP26.04■■□□□ 1.76
AC063943.3-201ENST00000615562 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
AC063943.3-201ENST00000615562 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
AC063943.3-201ENST00000615562 PHF23Q9BUL5 403 aaPredicted RBP21.87■■□□□ 1.09
AC063943.3-201ENST00000615562 FOXD1Q16676 465 aa20.68■□□□□ 0.9
AC063943.3-201ENST00000615562 PLPPR3Q6T4P5 718 aa19.68■□□□□ 0.74
AC063943.3-201ENST00000615562 MSH5O43196 834 aa19.35■□□□□ 0.69
AC063943.3-201ENST00000615562 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
AC063943.3-201ENST00000615562 PIAS4Q8N2W9 510 aaPredicted RBP19.24■□□□□ 0.67
AC063943.3-201ENST00000615562 ADRA2BP18089 450 aa19.19■□□□□ 0.66
AC063943.3-201ENST00000615562 POTEDQ86YR6 584 aa18.94■□□□□ 0.62
AC063943.3-201ENST00000615562 MAPK8IP2Q13387 824 aaPredicted RBP17.63■□□□□ 0.41
AC063943.3-201ENST00000615562 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
AC063943.3-201ENST00000615562 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
AC063943.3-201ENST00000615562 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
AC063943.3-201ENST00000615562 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
AC063943.3-201ENST00000615562 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
AC063943.3-201ENST00000615562 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
AC063943.3-201ENST00000615562 DCAF8L1A6NGE4 600 aa16.64■□□□□ 0.25
AC063943.3-201ENST00000615562 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
AC063943.3-201ENST00000615562 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
AC063943.3-201ENST00000615562 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
AC063943.3-201ENST00000615562 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
AC063943.3-201ENST00000615562 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
AC063943.3-201ENST00000615562 C1QBPQ07021 282 aaKnown RBP16.29■□□□□ 0.2
AC063943.3-201ENST00000615562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.15
AC063943.3-201ENST00000615562 KCNA4P22459 653 aa15.98■□□□□ 0.15
AC063943.3-201ENST00000615562 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
AC063943.3-201ENST00000615562 SLC4A2P04920 1241 aa15.66■□□□□ 0.1
AC063943.3-201ENST00000615562 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
AC063943.3-201ENST00000615562 DSG3P32926 999 aa15.47■□□□□ 0.07
AC063943.3-201ENST00000615562 CAPN15O75808 1086 aa15.4■□□□□ 0.06
AC063943.3-201ENST00000615562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
AC063943.3-201ENST00000615562 HNRNPUL2Q1KMD3 747 aaKnown RBP15.29■□□□□ 0.04
AC063943.3-201ENST00000615562 APLP2Q06481 763 aa15.28■□□□□ 0.04
AC063943.3-201ENST00000615562 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
AC063943.3-201ENST00000615562 SAMD1Q6SPF0 538 aaPredicted RBP15.21■□□□□ 0.03
AC063943.3-201ENST00000615562 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
AC063943.3-201ENST00000615562 MYCNP04198 464 aaPredicted RBP15.11■□□□□ 0.01
AC063943.3-201ENST00000615562 ABCB7O75027 752 aa15.05■□□□□ -0
AC063943.3-201ENST00000615562 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
AC063943.3-201ENST00000615562 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
AC063943.3-201ENST00000615562 POTEHQ6S545 545 aa14.81□□□□□ -0.04
AC063943.3-201ENST00000615562 POLA2Q14181 598 aa14.8□□□□□ -0.04
AC063943.3-201ENST00000615562 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
AC063943.3-201ENST00000615562 ZBTB22O15209 634 aa14.74□□□□□ -0.05
AC063943.3-201ENST00000615562 RBM42Q9BTD8 480 aaKnown RBP14.72□□□□□ -0.05
AC063943.3-201ENST00000615562 ATXN8OSP0DMR3 200 aa14.54□□□□□ -0.08
AC063943.3-201ENST00000615562 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
AC063943.3-201ENST00000615562 CHRDL2Q6WN34 429 aa14.4□□□□□ -0.1
AC063943.3-201ENST00000615562 AKT1S1Q96B36 256 aa14.4□□□□□ -0.1
AC063943.3-201ENST00000615562 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
AC063943.3-201ENST00000615562 REM2Q8IYK8 340 aaPredicted RBP14.24□□□□□ -0.13
AC063943.3-201ENST00000615562 MKRN4PQ13434 485 aaPredicted RBP14.12□□□□□ -0.15
AC063943.3-201ENST00000615562 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
AC063943.3-201ENST00000615562 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
AC063943.3-201ENST00000615562 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
AC063943.3-201ENST00000615562 FBLN2P98095 1184 aa14.1□□□□□ -0.15
AC063943.3-201ENST00000615562 PITPNM1O00562 1244 aa14.09□□□□□ -0.15
AC063943.3-201ENST00000615562 PIP4P2Q8N4L2 257 aa14.07□□□□□ -0.16
AC063943.3-201ENST00000615562 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.16
AC063943.3-201ENST00000615562 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
AC063943.3-201ENST00000615562 SSUH2Q9Y2M2 353 aa13.98□□□□□ -0.17
AC063943.3-201ENST00000615562 SP7Q8TDD2 431 aaPredicted RBP13.88□□□□□ -0.19
AC063943.3-201ENST00000615562 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
AC063943.3-201ENST00000615562 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
AC063943.3-201ENST00000615562 HAX1O00165 279 aa13.71□□□□□ -0.21
AC063943.3-201ENST00000615562 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
AC063943.3-201ENST00000615562 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
AC063943.3-201ENST00000615562 EVX2Q03828 476 aa13.66□□□□□ -0.22
AC063943.3-201ENST00000615562 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
AC063943.3-201ENST00000615562 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
AC063943.3-201ENST00000615562 C19orf67A6NJJ6 358 aa13.58□□□□□ -0.24
AC063943.3-201ENST00000615562 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
AC063943.3-201ENST00000615562 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
AC063943.3-201ENST00000615562 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
AC063943.3-201ENST00000615562 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
AC063943.3-201ENST00000615562 GABBR2O75899 941 aa13.33□□□□□ -0.28
AC063943.3-201ENST00000615562 STAG3Q9UJ98 1225 aa13.31□□□□□ -0.28
AC063943.3-201ENST00000615562 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
AC063943.3-201ENST00000615562 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
AC063943.3-201ENST00000615562 PROM2Q8N271 834 aa13.22□□□□□ -0.29
AC063943.3-201ENST00000615562 CLCN6P51797 869 aa13.19□□□□□ -0.3
AC063943.3-201ENST00000615562 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
AC063943.3-201ENST00000615562 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
AC063943.3-201ENST00000615562 POTEIP0CG38 1075 aa13.1□□□□□ -0.31
AC063943.3-201ENST00000615562 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
AC063943.3-201ENST00000615562 LHX8Q68G74 356 aa12.98□□□□□ -0.33
AC063943.3-201ENST00000615562 NPM1P06748 294 aaKnown RBP eCLIP12.95□□□□□ -0.34
AC063943.3-201ENST00000615562 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
AC063943.3-201ENST00000615562 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
AC063943.3-201ENST00000615562 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
AC063943.3-201ENST00000615562 PHF12Q96QT6 1004 aa12.86□□□□□ -0.35
AC063943.3-201ENST00000615562 CCDC61Q9Y6R9 512 aa12.76□□□□□ -0.37
AC063943.3-201ENST00000615562 ASTLQ6HA08 431 aaPredicted RBP12.72□□□□□ -0.37
AC063943.3-201ENST00000615562 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
AC063943.3-201ENST00000615562 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
AC063943.3-201ENST00000615562 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
AC063943.3-201ENST00000615562 MIER1Q8N108 512 aa12.66□□□□□ -0.38
AC063943.3-201ENST00000615562 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms