RNA–Protein interactions for RNA: ENST00000340912.5

SENP8-201, Transcript of SUMO peptidase family member, NEDD8 specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP8, Length 4,281 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP8-201ENST00000340912 NISCHQ9Y2I1 1504 aa14.14□□□□□ -0.15
SENP8-201ENST00000340912 SHROOM4Q9ULL8 1493 aa12.37□□□□□ -0.43
SENP8-201ENST00000340912 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
SENP8-201ENST00000340912 HRCP23327 699 aa12.29□□□□□ -0.44
SENP8-201ENST00000340912 PCGF6Q9BYE7 350 aa12.08□□□□□ -0.48
SENP8-201ENST00000340912 CHIC1Q5VXU3 224 aa12.04□□□□□ -0.48
SENP8-201ENST00000340912 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.49
SENP8-201ENST00000340912 MYO15BQ96JP2 1530 aa11.98□□□□□ -0.49
SENP8-201ENST00000340912 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
SENP8-201ENST00000340912 DCAF1Q9Y4B6 1507 aa11.92□□□□□ -0.5
SENP8-201ENST00000340912 CCDC180Q9P1Z9 1646 aa11.91□□□□□ -0.5
SENP8-201ENST00000340912 PPARGC1BQ86YN6 1023 aaKnown RBP11.89□□□□□ -0.51
SENP8-201ENST00000340912 DCAF8L2P0C7V8 631 aa11.83□□□□□ -0.52
SENP8-201ENST00000340912 ZEB1P37275 1124 aaPredicted RBP11.81□□□□□ -0.52
SENP8-201ENST00000340912 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
SENP8-201ENST00000340912 LOC105371045A0A1W2PR82 267 aa11.67□□□□□ -0.54
SENP8-201ENST00000340912 MYT1Q01538 1121 aa11.52□□□□□ -0.56
SENP8-201ENST00000340912 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
SENP8-201ENST00000340912 SCAF1Q9H7N4 1312 aaKnown RBP11.47□□□□□ -0.57
SENP8-201ENST00000340912 ABCC9O60706 1549 aa11.43□□□□□ -0.58
SENP8-201ENST00000340912 CENPBP07199 599 aaPredicted RBP11.42□□□□□ -0.58
SENP8-201ENST00000340912 FAM9AQ8IZU1 332 aaPredicted RBP11.4□□□□□ -0.59
SENP8-201ENST00000340912 ACIN1Q9UKV3 1341 aaKnown RBP11.34□□□□□ -0.59
SENP8-201ENST00000340912 CCER1Q8TC90 406 aaPredicted RBP11.34□□□□□ -0.59
SENP8-201ENST00000340912 RSF1Q96T23 1441 aaPredicted RBP11.3□□□□□ -0.6
SENP8-201ENST00000340912 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
SENP8-201ENST00000340912 RB1CC1Q8TDY2 1594 aa11.28□□□□□ -0.6
SENP8-201ENST00000340912 DIEXFQ68CQ4 756 aaKnown RBP11.24□□□□□ -0.61
SENP8-201ENST00000340912 SCRIBQ14160 1630 aa11.23□□□□□ -0.61
SENP8-201ENST00000340912 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
SENP8-201ENST00000340912 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
SENP8-201ENST00000340912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
SENP8-201ENST00000340912 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
SENP8-201ENST00000340912 TTBK1Q5TCY1 1321 aaPredicted RBP11.05□□□□□ -0.64
SENP8-201ENST00000340912 YTHDC1Q96MU7 727 aaKnown RBP11.04□□□□□ -0.64
SENP8-201ENST00000340912 WRNQ14191 1432 aaPredicted RBP eCLIP11.02□□□□□ -0.65
SENP8-201ENST00000340912 CEP162Q5TB80 1403 aa10.98□□□□□ -0.65
SENP8-201ENST00000340912 MROH2BQ7Z745 1585 aa10.98□□□□□ -0.65
SENP8-201ENST00000340912 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.66
SENP8-201ENST00000340912 BAZ1AQ9NRL2 1556 aaPredicted RBP10.96□□□□□ -0.66
SENP8-201ENST00000340912 NACADO15069 1562 aa10.96□□□□□ -0.66
SENP8-201ENST00000340912 CLSPNQ9HAW4 1339 aa10.94□□□□□ -0.66
SENP8-201ENST00000340912 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
SENP8-201ENST00000340912 WIZO95785 1651 aa10.94□□□□□ -0.66
SENP8-201ENST00000340912 EEA1Q15075 1411 aa10.94□□□□□ -0.66
SENP8-201ENST00000340912 TNIKQ9UKE5 1360 aa10.93□□□□□ -0.66
SENP8-201ENST00000340912 APLP2Q06481 763 aa10.9□□□□□ -0.66
SENP8-201ENST00000340912 MIER1Q8N108 512 aa10.87□□□□□ -0.67
SENP8-201ENST00000340912 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
SENP8-201ENST00000340912 GOLGA3Q08378 1498 aa10.86□□□□□ -0.67
SENP8-201ENST00000340912 CSRNP3Q8WYN3 585 aa10.86□□□□□ -0.67
SENP8-201ENST00000340912 HNRNPUL2Q1KMD3 747 aaKnown RBP10.85□□□□□ -0.67
SENP8-201ENST00000340912 ABCC8Q09428 1581 aa10.84□□□□□ -0.67
SENP8-201ENST00000340912 TOP2AP11388 1531 aaKnown RBP10.84□□□□□ -0.67
SENP8-201ENST00000340912 CCDC88BA6NC98 1476 aa10.83□□□□□ -0.68
SENP8-201ENST00000340912 SOGA1O94964 1423 aa10.79□□□□□ -0.68
SENP8-201ENST00000340912 CEP164Q9UPV0 1460 aa10.76□□□□□ -0.69
SENP8-201ENST00000340912 CLIP1P30622 1438 aa10.74□□□□□ -0.69
SENP8-201ENST00000340912 SMARCA2P51531 1590 aa10.74□□□□□ -0.69
SENP8-201ENST00000340912 SMARCA4P51532 1647 aa10.72□□□□□ -0.69
SENP8-201ENST00000340912 VPS8Q8N3P4 1428 aa10.71□□□□□ -0.69
SENP8-201ENST00000340912 SUPT16HQ9Y5B9 1047 aaKnown RBP10.7□□□□□ -0.7
SENP8-201ENST00000340912 KIF21BO75037 1637 aa10.69□□□□□ -0.7
SENP8-201ENST00000340912 RUSC2Q8N2Y8 1516 aa10.67□□□□□ -0.7
SENP8-201ENST00000340912 BAZ1BQ9UIG0 1483 aaKnown RBP10.67□□□□□ -0.7
SENP8-201ENST00000340912 ANP32EQ9BTT0 268 aa10.66□□□□□ -0.7
SENP8-201ENST00000340912 NEFLP07196 543 aa10.64□□□□□ -0.71
SENP8-201ENST00000340912 RANGAP1P46060 587 aaPredicted RBP10.62□□□□□ -0.71
SENP8-201ENST00000340912 TSHZ2Q9NRE2 1034 aa10.59□□□□□ -0.71
SENP8-201ENST00000340912 DHX57Q6P158 1386 aaKnown RBP10.59□□□□□ -0.71
SENP8-201ENST00000340912 SYNJ1O43426 1573 aa10.54□□□□□ -0.72
SENP8-201ENST00000340912 RAPGEF2Q9Y4G8 1499 aa10.54□□□□□ -0.72
SENP8-201ENST00000340912 BCANQ96GW7 911 aa10.53□□□□□ -0.72
SENP8-201ENST00000340912 BCL11AQ9H165 835 aa10.51□□□□□ -0.73
SENP8-201ENST00000340912 FKBP8Q14318 412 aa10.5□□□□□ -0.73
SENP8-201ENST00000340912 ERICH6Q7L0X2 663 aa10.5□□□□□ -0.73
SENP8-201ENST00000340912 ERICH3Q5RHP9 1530 aa10.48□□□□□ -0.73
SENP8-201ENST00000340912 CCNB3Q8WWL7 1395 aa10.47□□□□□ -0.73
SENP8-201ENST00000340912 ITGAEP38570 1179 aa10.47□□□□□ -0.73
SENP8-201ENST00000340912 RRBP1Q9P2E9 1410 aaKnown RBP10.46□□□□□ -0.73
SENP8-201ENST00000340912 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
SENP8-201ENST00000340912 ANP32CO43423 234 aa10.44□□□□□ -0.74
SENP8-201ENST00000340912 CUX2O14529 1486 aa10.43□□□□□ -0.74
SENP8-201ENST00000340912 UNC13AQ9UPW8 1703 aa10.43□□□□□ -0.74
SENP8-201ENST00000340912 ARAP1Q96P48 1450 aa10.43□□□□□ -0.74
SENP8-201ENST00000340912 TOP2BQ02880 1626 aa10.41□□□□□ -0.74
SENP8-201ENST00000340912 DDX10Q13206 875 aaKnown RBP10.41□□□□□ -0.74
SENP8-201ENST00000340912 KANK4Q5T7N3 995 aaPredicted RBP10.41□□□□□ -0.74
SENP8-201ENST00000340912 RBM19Q9Y4C8 960 aaKnown RBP10.39□□□□□ -0.75
SENP8-201ENST00000340912 CCER2I3L3R5 266 aa10.39□□□□□ -0.75
SENP8-201ENST00000340912 RAB3GAP2Q9H2M9 1393 aa10.39□□□□□ -0.75
SENP8-201ENST00000340912 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
SENP8-201ENST00000340912 KIF27Q86VH2 1401 aa10.38□□□□□ -0.75
SENP8-201ENST00000340912 PRXQ9BXM0 1461 aa10.38□□□□□ -0.75
SENP8-201ENST00000340912 TIMELESSQ9UNS1 1208 aa10.37□□□□□ -0.75
SENP8-201ENST00000340912 CDK11AQ9UQ88 783 aaPredicted RBP10.37□□□□□ -0.75
SENP8-201ENST00000340912 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
SENP8-201ENST00000340912 SETD5Q9C0A6 1442 aa10.36□□□□□ -0.75
SENP8-201ENST00000340912 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
SENP8-201ENST00000340912 KCNH8Q96L42 1107 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms