RNA–Protein interactions for RNA: ENST00000299339.2

CLDN10-201, Transcript of claudin 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN10, Length 949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN10-201ENST00000299339 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
CLDN10-201ENST00000299339 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
CLDN10-201ENST00000299339 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
CLDN10-201ENST00000299339 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
CLDN10-201ENST00000299339 FOXD1Q16676 465 aa19.87■□□□□ 0.77
CLDN10-201ENST00000299339 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
CLDN10-201ENST00000299339 MSH5O43196 834 aa18.66■□□□□ 0.58
CLDN10-201ENST00000299339 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
CLDN10-201ENST00000299339 PIAS4Q8N2W9 510 aaPredicted RBP18.46■□□□□ 0.55
CLDN10-201ENST00000299339 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
CLDN10-201ENST00000299339 ADRA2BP18089 450 aa18.28■□□□□ 0.52
CLDN10-201ENST00000299339 MAPK8IP2Q13387 824 aaPredicted RBP16.89■□□□□ 0.29
CLDN10-201ENST00000299339 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
CLDN10-201ENST00000299339 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
CLDN10-201ENST00000299339 NISCHQ9Y2I1 1504 aa16.39■□□□□ 0.21
CLDN10-201ENST00000299339 PPP4R3CPQ6ZMV5 832 aa16.21■□□□□ 0.19
CLDN10-201ENST00000299339 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
CLDN10-201ENST00000299339 HOXD11P31277 338 aaPredicted RBP16.12■□□□□ 0.17
CLDN10-201ENST00000299339 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
CLDN10-201ENST00000299339 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
CLDN10-201ENST00000299339 RNF39Q9H2S5 420 aa15.94■□□□□ 0.14
CLDN10-201ENST00000299339 RNF216Q9NWF9 866 aaPredicted RBP15.9■□□□□ 0.14
CLDN10-201ENST00000299339 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
CLDN10-201ENST00000299339 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
CLDN10-201ENST00000299339 ABCC9O60706 1549 aa15.62■□□□□ 0.09
CLDN10-201ENST00000299339 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
CLDN10-201ENST00000299339 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
CLDN10-201ENST00000299339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLDN10-201ENST00000299339 CCDC180Q9P1Z9 1646 aa15.04■□□□□ -0
CLDN10-201ENST00000299339 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
CLDN10-201ENST00000299339 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
CLDN10-201ENST00000299339 DSG3P32926 999 aa14.82□□□□□ -0.04
CLDN10-201ENST00000299339 POTEHQ6S545 545 aa14.82□□□□□ -0.04
CLDN10-201ENST00000299339 CAPN15O75808 1086 aa14.79□□□□□ -0.04
CLDN10-201ENST00000299339 KCNA4P22459 653 aa14.75□□□□□ -0.05
CLDN10-201ENST00000299339 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
CLDN10-201ENST00000299339 RB1CC1Q8TDY2 1594 aa14.6□□□□□ -0.07
CLDN10-201ENST00000299339 TRHP20396 242 aaPredicted RBP14.48□□□□□ -0.09
CLDN10-201ENST00000299339 APLP2Q06481 763 aa14.47□□□□□ -0.09
CLDN10-201ENST00000299339 ZNF219Q9P2Y4 722 aaPredicted RBP14.46□□□□□ -0.09
CLDN10-201ENST00000299339 ABCB7O75027 752 aa14.44□□□□□ -0.1
CLDN10-201ENST00000299339 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
CLDN10-201ENST00000299339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
CLDN10-201ENST00000299339 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
CLDN10-201ENST00000299339 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
CLDN10-201ENST00000299339 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
CLDN10-201ENST00000299339 SAMD1Q6SPF0 538 aaPredicted RBP14.34□□□□□ -0.11
CLDN10-201ENST00000299339 NACADO15069 1562 aa14.33□□□□□ -0.12
CLDN10-201ENST00000299339 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
CLDN10-201ENST00000299339 CECR2Q9BXF3 1484 aa14.13□□□□□ -0.15
CLDN10-201ENST00000299339 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
CLDN10-201ENST00000299339 CC2D2AQ9P2K1 1620 aa14.11□□□□□ -0.15
CLDN10-201ENST00000299339 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
CLDN10-201ENST00000299339 POLA2Q14181 598 aa14.06□□□□□ -0.16
CLDN10-201ENST00000299339 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
CLDN10-201ENST00000299339 SHROOM4Q9ULL8 1493 aa13.93□□□□□ -0.18
CLDN10-201ENST00000299339 CHRDL2Q6WN34 429 aa13.93□□□□□ -0.18
CLDN10-201ENST00000299339 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
CLDN10-201ENST00000299339 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
CLDN10-201ENST00000299339 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
CLDN10-201ENST00000299339 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
CLDN10-201ENST00000299339 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
CLDN10-201ENST00000299339 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
CLDN10-201ENST00000299339 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
CLDN10-201ENST00000299339 CUX2O14529 1486 aa13.73□□□□□ -0.21
CLDN10-201ENST00000299339 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
CLDN10-201ENST00000299339 REM2Q8IYK8 340 aaPredicted RBP13.63□□□□□ -0.23
CLDN10-201ENST00000299339 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
CLDN10-201ENST00000299339 ZBTB22O15209 634 aa13.59□□□□□ -0.23
CLDN10-201ENST00000299339 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
CLDN10-201ENST00000299339 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
CLDN10-201ENST00000299339 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
CLDN10-201ENST00000299339 ERCC6Q03468 1493 aa13.53□□□□□ -0.24
CLDN10-201ENST00000299339 DCAF1Q9Y4B6 1507 aa13.5□□□□□ -0.25
CLDN10-201ENST00000299339 PITPNM1O00562 1244 aa13.49□□□□□ -0.25
CLDN10-201ENST00000299339 ZCCHC6Q5VYS8 1495 aaKnown RBP13.45□□□□□ -0.26
CLDN10-201ENST00000299339 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
CLDN10-201ENST00000299339 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLDN10-201ENST00000299339 HAX1O00165 279 aa13.34□□□□□ -0.27
CLDN10-201ENST00000299339 SPDYE2BA6NHP3 402 aa13.31□□□□□ -0.28
CLDN10-201ENST00000299339 SPDYE6P0CI01 402 aa13.31□□□□□ -0.28
CLDN10-201ENST00000299339 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
CLDN10-201ENST00000299339 THOC2Q8NI27 1593 aaKnown RBP13.28□□□□□ -0.28
CLDN10-201ENST00000299339 FBLN2P98095 1184 aa13.27□□□□□ -0.29
CLDN10-201ENST00000299339 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
CLDN10-201ENST00000299339 NESP48681 1621 aa13.24□□□□□ -0.29
CLDN10-201ENST00000299339 EVX2Q03828 476 aa13.22□□□□□ -0.29
CLDN10-201ENST00000299339 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
CLDN10-201ENST00000299339 NCAPD3P42695 1498 aa13.22□□□□□ -0.29
CLDN10-201ENST00000299339 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
CLDN10-201ENST00000299339 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
CLDN10-201ENST00000299339 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
CLDN10-201ENST00000299339 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
CLDN10-201ENST00000299339 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
CLDN10-201ENST00000299339 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
CLDN10-201ENST00000299339 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
CLDN10-201ENST00000299339 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
CLDN10-201ENST00000299339 HMGXB3Q12766 1538 aa13.09□□□□□ -0.31
CLDN10-201ENST00000299339 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
CLDN10-201ENST00000299339 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms