RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
HMGB1P36-201ENST00000487709 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
HMGB1P36-201ENST00000487709 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.17
HMGB1P36-201ENST00000487709 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
HMGB1P36-201ENST00000487709 FOXD1Q16676 465 aa20.9■□□□□ 0.94
HMGB1P36-201ENST00000487709 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
HMGB1P36-201ENST00000487709 MSH5O43196 834 aa19.58■□□□□ 0.72
HMGB1P36-201ENST00000487709 PIAS4Q8N2W9 510 aaPredicted RBP19.54■□□□□ 0.72
HMGB1P36-201ENST00000487709 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
HMGB1P36-201ENST00000487709 ADRA2BP18089 450 aa19.42■□□□□ 0.7
HMGB1P36-201ENST00000487709 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
HMGB1P36-201ENST00000487709 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
HMGB1P36-201ENST00000487709 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
HMGB1P36-201ENST00000487709 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
HMGB1P36-201ENST00000487709 PPP4R3CPQ6ZMV5 832 aa17.32■□□□□ 0.36
HMGB1P36-201ENST00000487709 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
HMGB1P36-201ENST00000487709 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
HMGB1P36-201ENST00000487709 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
HMGB1P36-201ENST00000487709 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
HMGB1P36-201ENST00000487709 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
HMGB1P36-201ENST00000487709 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
HMGB1P36-201ENST00000487709 NCBP3Q53F19 620 aaKnown RBP16.61■□□□□ 0.25
HMGB1P36-201ENST00000487709 C1QBPQ07021 282 aaKnown RBP16.43■□□□□ 0.22
HMGB1P36-201ENST00000487709 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
HMGB1P36-201ENST00000487709 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
HMGB1P36-201ENST00000487709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
HMGB1P36-201ENST00000487709 KCNA4P22459 653 aa16■□□□□ 0.15
HMGB1P36-201ENST00000487709 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
HMGB1P36-201ENST00000487709 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
HMGB1P36-201ENST00000487709 CAPN15O75808 1086 aa15.73■□□□□ 0.11
HMGB1P36-201ENST00000487709 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
HMGB1P36-201ENST00000487709 DSG3P32926 999 aa15.61■□□□□ 0.09
HMGB1P36-201ENST00000487709 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
HMGB1P36-201ENST00000487709 APLP2Q06481 763 aa15.42■□□□□ 0.06
HMGB1P36-201ENST00000487709 ABCB7O75027 752 aa15.39■□□□□ 0.05
HMGB1P36-201ENST00000487709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
HMGB1P36-201ENST00000487709 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
HMGB1P36-201ENST00000487709 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
HMGB1P36-201ENST00000487709 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
HMGB1P36-201ENST00000487709 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
HMGB1P36-201ENST00000487709 POTEHQ6S545 545 aa15.14■□□□□ 0.01
HMGB1P36-201ENST00000487709 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
HMGB1P36-201ENST00000487709 POLA2Q14181 598 aa14.98□□□□□ -0.01
HMGB1P36-201ENST00000487709 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
HMGB1P36-201ENST00000487709 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
HMGB1P36-201ENST00000487709 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
HMGB1P36-201ENST00000487709 ZBTB22O15209 634 aa14.7□□□□□ -0.06
HMGB1P36-201ENST00000487709 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
HMGB1P36-201ENST00000487709 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
HMGB1P36-201ENST00000487709 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
HMGB1P36-201ENST00000487709 AKT1S1Q96B36 256 aa14.52□□□□□ -0.09
HMGB1P36-201ENST00000487709 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
HMGB1P36-201ENST00000487709 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
HMGB1P36-201ENST00000487709 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
HMGB1P36-201ENST00000487709 PIP4P2Q8N4L2 257 aa14.27□□□□□ -0.13
HMGB1P36-201ENST00000487709 FBLN2P98095 1184 aa14.26□□□□□ -0.13
HMGB1P36-201ENST00000487709 SPDYE2BA6NHP3 402 aa14.17□□□□□ -0.14
HMGB1P36-201ENST00000487709 SPDYE6P0CI01 402 aa14.17□□□□□ -0.14
HMGB1P36-201ENST00000487709 SPDYE2Q495Y8 402 aa14.17□□□□□ -0.14
HMGB1P36-201ENST00000487709 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.15
HMGB1P36-201ENST00000487709 MKRN4PQ13434 485 aaPredicted RBP14.13□□□□□ -0.15
HMGB1P36-201ENST00000487709 SP7Q8TDD2 431 aaPredicted RBP14.13□□□□□ -0.15
HMGB1P36-201ENST00000487709 HAX1O00165 279 aa14.07□□□□□ -0.16
HMGB1P36-201ENST00000487709 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
HMGB1P36-201ENST00000487709 CLEC11AQ9Y240 323 aa14.02□□□□□ -0.17
HMGB1P36-201ENST00000487709 SPDYE1Q8NFV5 336 aaPredicted RBP13.97□□□□□ -0.17
HMGB1P36-201ENST00000487709 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
HMGB1P36-201ENST00000487709 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
HMGB1P36-201ENST00000487709 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
HMGB1P36-201ENST00000487709 EVX2Q03828 476 aa13.86□□□□□ -0.19
HMGB1P36-201ENST00000487709 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
HMGB1P36-201ENST00000487709 CHADLQ6NUI6 762 aa13.76□□□□□ -0.21
HMGB1P36-201ENST00000487709 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
HMGB1P36-201ENST00000487709 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
HMGB1P36-201ENST00000487709 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
HMGB1P36-201ENST00000487709 GABBR2O75899 941 aa13.53□□□□□ -0.24
HMGB1P36-201ENST00000487709 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
HMGB1P36-201ENST00000487709 CD44P16070 742 aaKnown RBP13.47□□□□□ -0.25
HMGB1P36-201ENST00000487709 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
HMGB1P36-201ENST00000487709 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
HMGB1P36-201ENST00000487709 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
HMGB1P36-201ENST00000487709 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.29
HMGB1P36-201ENST00000487709 LHX8Q68G74 356 aa13.26□□□□□ -0.29
HMGB1P36-201ENST00000487709 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
HMGB1P36-201ENST00000487709 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
HMGB1P36-201ENST00000487709 CLCN6P51797 869 aa13.19□□□□□ -0.3
HMGB1P36-201ENST00000487709 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
HMGB1P36-201ENST00000487709 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
HMGB1P36-201ENST00000487709 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
HMGB1P36-201ENST00000487709 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
HMGB1P36-201ENST00000487709 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
HMGB1P36-201ENST00000487709 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
HMGB1P36-201ENST00000487709 PROM2Q8N271 834 aa13□□□□□ -0.33
HMGB1P36-201ENST00000487709 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
HMGB1P36-201ENST00000487709 MS4A3Q96HJ5 214 aa12.9□□□□□ -0.34
HMGB1P36-201ENST00000487709 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
HMGB1P36-201ENST00000487709 MIER1Q8N108 512 aa12.83□□□□□ -0.36
HMGB1P36-201ENST00000487709 POTEB2H3BUK9 544 aa12.82□□□□□ -0.36
HMGB1P36-201ENST00000487709 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
HMGB1P36-201ENST00000487709 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms