RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 AEBP2Q6ZN18 517 aaPredicted RBP24.42■■□□□ 1.5
RNU6-839P-201ENST00000363347 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
RNU6-839P-201ENST00000363347 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
RNU6-839P-201ENST00000363347 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
RNU6-839P-201ENST00000363347 FOXD1Q16676 465 aa19.55■□□□□ 0.72
RNU6-839P-201ENST00000363347 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
RNU6-839P-201ENST00000363347 MSH5O43196 834 aa18.53■□□□□ 0.56
RNU6-839P-201ENST00000363347 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
RNU6-839P-201ENST00000363347 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
RNU6-839P-201ENST00000363347 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
RNU6-839P-201ENST00000363347 ADRA2BP18089 450 aa17.81■□□□□ 0.44
RNU6-839P-201ENST00000363347 DMRT2Q9Y5R5 561 aa16.52■□□□□ 0.24
RNU6-839P-201ENST00000363347 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
RNU6-839P-201ENST00000363347 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
RNU6-839P-201ENST00000363347 CACNB1Q02641 598 aaPredicted RBP16.19■□□□□ 0.18
RNU6-839P-201ENST00000363347 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
RNU6-839P-201ENST00000363347 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
RNU6-839P-201ENST00000363347 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
RNU6-839P-201ENST00000363347 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
RNU6-839P-201ENST00000363347 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
RNU6-839P-201ENST00000363347 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
RNU6-839P-201ENST00000363347 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
RNU6-839P-201ENST00000363347 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
RNU6-839P-201ENST00000363347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.01
RNU6-839P-201ENST00000363347 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
RNU6-839P-201ENST00000363347 POTEHQ6S545 545 aa14.73□□□□□ -0.05
RNU6-839P-201ENST00000363347 NPM3O75607 178 aaKnown RBP14.68□□□□□ -0.06
RNU6-839P-201ENST00000363347 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
RNU6-839P-201ENST00000363347 DSG3P32926 999 aa14.57□□□□□ -0.08
RNU6-839P-201ENST00000363347 CAPN15O75808 1086 aa14.56□□□□□ -0.08
RNU6-839P-201ENST00000363347 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
RNU6-839P-201ENST00000363347 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
RNU6-839P-201ENST00000363347 APLP2Q06481 763 aa14.17□□□□□ -0.14
RNU6-839P-201ENST00000363347 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
RNU6-839P-201ENST00000363347 ABCB7O75027 752 aa14.16□□□□□ -0.14
RNU6-839P-201ENST00000363347 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
RNU6-839P-201ENST00000363347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
RNU6-839P-201ENST00000363347 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
RNU6-839P-201ENST00000363347 KCNA4P22459 653 aa13.95□□□□□ -0.18
RNU6-839P-201ENST00000363347 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
RNU6-839P-201ENST00000363347 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
RNU6-839P-201ENST00000363347 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
RNU6-839P-201ENST00000363347 POLA2Q14181 598 aa13.69□□□□□ -0.22
RNU6-839P-201ENST00000363347 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
RNU6-839P-201ENST00000363347 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
RNU6-839P-201ENST00000363347 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
RNU6-839P-201ENST00000363347 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
RNU6-839P-201ENST00000363347 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
RNU6-839P-201ENST00000363347 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
RNU6-839P-201ENST00000363347 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
RNU6-839P-201ENST00000363347 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
RNU6-839P-201ENST00000363347 HAX1O00165 279 aa13.28□□□□□ -0.28
RNU6-839P-201ENST00000363347 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
RNU6-839P-201ENST00000363347 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
RNU6-839P-201ENST00000363347 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
RNU6-839P-201ENST00000363347 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
RNU6-839P-201ENST00000363347 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
RNU6-839P-201ENST00000363347 EVX2Q03828 476 aa13.04□□□□□ -0.32
RNU6-839P-201ENST00000363347 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
RNU6-839P-201ENST00000363347 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
RNU6-839P-201ENST00000363347 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
RNU6-839P-201ENST00000363347 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
RNU6-839P-201ENST00000363347 FBLN2P98095 1184 aa12.86□□□□□ -0.35
RNU6-839P-201ENST00000363347 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
RNU6-839P-201ENST00000363347 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
RNU6-839P-201ENST00000363347 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
RNU6-839P-201ENST00000363347 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
RNU6-839P-201ENST00000363347 ZBTB22O15209 634 aa12.81□□□□□ -0.36
RNU6-839P-201ENST00000363347 GABBR2O75899 941 aa12.74□□□□□ -0.37
RNU6-839P-201ENST00000363347 LHX8Q68G74 356 aa12.71□□□□□ -0.37
RNU6-839P-201ENST00000363347 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
RNU6-839P-201ENST00000363347 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
RNU6-839P-201ENST00000363347 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
RNU6-839P-201ENST00000363347 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
RNU6-839P-201ENST00000363347 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
RNU6-839P-201ENST00000363347 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
RNU6-839P-201ENST00000363347 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
RNU6-839P-201ENST00000363347 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
RNU6-839P-201ENST00000363347 CD44P16070 742 aaKnown RBP12.46□□□□□ -0.41
RNU6-839P-201ENST00000363347 FARP1Q9Y4F1 1045 aaPredicted RBP12.4□□□□□ -0.42
RNU6-839P-201ENST00000363347 CLCN6P51797 869 aa12.39□□□□□ -0.43
RNU6-839P-201ENST00000363347 PLSCR2Q9NRY7 297 aa12.33□□□□□ -0.44
RNU6-839P-201ENST00000363347 DCBLD2Q96PD2 775 aa12.31□□□□□ -0.44
RNU6-839P-201ENST00000363347 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
RNU6-839P-201ENST00000363347 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
RNU6-839P-201ENST00000363347 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
RNU6-839P-201ENST00000363347 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
RNU6-839P-201ENST00000363347 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
RNU6-839P-201ENST00000363347 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
RNU6-839P-201ENST00000363347 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
RNU6-839P-201ENST00000363347 PAK3O75914 559 aaPredicted RBP12.02□□□□□ -0.49
RNU6-839P-201ENST00000363347 POTEMA6NI47 508 aa12.01□□□□□ -0.49
RNU6-839P-201ENST00000363347 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
RNU6-839P-201ENST00000363347 POTEGQ6S5H5 508 aa11.96□□□□□ -0.49
RNU6-839P-201ENST00000363347 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
RNU6-839P-201ENST00000363347 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
RNU6-839P-201ENST00000363347 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
RNU6-839P-201ENST00000363347 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
RNU6-839P-201ENST00000363347 ASTLQ6HA08 431 aaPredicted RBP11.84□□□□□ -0.51
RNU6-839P-201ENST00000363347 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms