RNA–Protein interactions for RNA: ENST00000444048.1

TRIM60P16-201, Transcript of tripartite motif containing 60 pseudogene 16, humanhuman

BASIC

Gene TRIM60P16, Length 694 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60P16-201ENST00000444048 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
TRIM60P16-201ENST00000444048 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
TRIM60P16-201ENST00000444048 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
TRIM60P16-201ENST00000444048 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
TRIM60P16-201ENST00000444048 FOXD1Q16676 465 aa17.71■□□□□ 0.43
TRIM60P16-201ENST00000444048 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
TRIM60P16-201ENST00000444048 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
TRIM60P16-201ENST00000444048 ADRA2BP18089 450 aa16.86■□□□□ 0.29
TRIM60P16-201ENST00000444048 PIAS4Q8N2W9 510 aaPredicted RBP16.63■□□□□ 0.25
TRIM60P16-201ENST00000444048 MSH5O43196 834 aa16.37■□□□□ 0.21
TRIM60P16-201ENST00000444048 MAPK8IP2Q13387 824 aaPredicted RBP15.39■□□□□ 0.05
TRIM60P16-201ENST00000444048 PPP4R3CPQ6ZMV5 832 aa15.39■□□□□ 0.05
TRIM60P16-201ENST00000444048 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
TRIM60P16-201ENST00000444048 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
TRIM60P16-201ENST00000444048 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
TRIM60P16-201ENST00000444048 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
TRIM60P16-201ENST00000444048 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
TRIM60P16-201ENST00000444048 KCNA4P22459 653 aa14.8□□□□□ -0.04
TRIM60P16-201ENST00000444048 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
TRIM60P16-201ENST00000444048 RNF216Q9NWF9 866 aaPredicted RBP14.75□□□□□ -0.05
TRIM60P16-201ENST00000444048 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
TRIM60P16-201ENST00000444048 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
TRIM60P16-201ENST00000444048 NISCHQ9Y2I1 1504 aa14.51□□□□□ -0.09
TRIM60P16-201ENST00000444048 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
TRIM60P16-201ENST00000444048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRIM60P16-201ENST00000444048 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
TRIM60P16-201ENST00000444048 RNF39Q9H2S5 420 aa14.03□□□□□ -0.16
TRIM60P16-201ENST00000444048 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
TRIM60P16-201ENST00000444048 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.2
TRIM60P16-201ENST00000444048 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.2
TRIM60P16-201ENST00000444048 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
TRIM60P16-201ENST00000444048 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
TRIM60P16-201ENST00000444048 ZBTB22O15209 634 aa13.63□□□□□ -0.23
TRIM60P16-201ENST00000444048 MYCNP04198 464 aaPredicted RBP13.56□□□□□ -0.24
TRIM60P16-201ENST00000444048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
TRIM60P16-201ENST00000444048 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
TRIM60P16-201ENST00000444048 SPINK5Q9NQ38 1064 aaPredicted RBP13.52□□□□□ -0.25
TRIM60P16-201ENST00000444048 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
TRIM60P16-201ENST00000444048 CAPN15O75808 1086 aa13.46□□□□□ -0.25
TRIM60P16-201ENST00000444048 APLP2Q06481 763 aa13.41□□□□□ -0.26
TRIM60P16-201ENST00000444048 EHMT2Q96KQ7 1210 aa13.4□□□□□ -0.26
TRIM60P16-201ENST00000444048 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
TRIM60P16-201ENST00000444048 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
TRIM60P16-201ENST00000444048 DSG3P32926 999 aa13.29□□□□□ -0.28
TRIM60P16-201ENST00000444048 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
TRIM60P16-201ENST00000444048 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
TRIM60P16-201ENST00000444048 ABCB7O75027 752 aa13.2□□□□□ -0.3
TRIM60P16-201ENST00000444048 ATXN8OSP0DMR3 200 aa13.17□□□□□ -0.3
TRIM60P16-201ENST00000444048 POLA2Q14181 598 aa13.09□□□□□ -0.31
TRIM60P16-201ENST00000444048 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
TRIM60P16-201ENST00000444048 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
TRIM60P16-201ENST00000444048 MKRN4PQ13434 485 aaPredicted RBP12.68□□□□□ -0.38
TRIM60P16-201ENST00000444048 FBLN2P98095 1184 aa12.67□□□□□ -0.38
TRIM60P16-201ENST00000444048 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
TRIM60P16-201ENST00000444048 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
TRIM60P16-201ENST00000444048 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
TRIM60P16-201ENST00000444048 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
TRIM60P16-201ENST00000444048 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
TRIM60P16-201ENST00000444048 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
TRIM60P16-201ENST00000444048 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
TRIM60P16-201ENST00000444048 ABCC9O60706 1549 aa12.39□□□□□ -0.43
TRIM60P16-201ENST00000444048 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
TRIM60P16-201ENST00000444048 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
TRIM60P16-201ENST00000444048 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
TRIM60P16-201ENST00000444048 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRIM60P16-201ENST00000444048 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
TRIM60P16-201ENST00000444048 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
TRIM60P16-201ENST00000444048 MYO15BQ96JP2 1530 aa12.18□□□□□ -0.46
TRIM60P16-201ENST00000444048 NACADO15069 1562 aa12.14□□□□□ -0.47
TRIM60P16-201ENST00000444048 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
TRIM60P16-201ENST00000444048 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
TRIM60P16-201ENST00000444048 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
TRIM60P16-201ENST00000444048 RB1CC1Q8TDY2 1594 aa12.09□□□□□ -0.47
TRIM60P16-201ENST00000444048 ZCCHC6Q5VYS8 1495 aaKnown RBP12.09□□□□□ -0.47
TRIM60P16-201ENST00000444048 POTEHQ6S545 545 aa12.09□□□□□ -0.47
TRIM60P16-201ENST00000444048 FKBP8Q14318 412 aa12.08□□□□□ -0.48
TRIM60P16-201ENST00000444048 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRIM60P16-201ENST00000444048 PROM2Q8N271 834 aa12.02□□□□□ -0.49
TRIM60P16-201ENST00000444048 PIP4P2Q8N4L2 257 aa12.02□□□□□ -0.49
TRIM60P16-201ENST00000444048 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
TRIM60P16-201ENST00000444048 PRR29P0C7W0 189 aa11.97□□□□□ -0.49
TRIM60P16-201ENST00000444048 STAG3Q9UJ98 1225 aa11.94□□□□□ -0.5
TRIM60P16-201ENST00000444048 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
TRIM60P16-201ENST00000444048 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
TRIM60P16-201ENST00000444048 CREBZFQ9NS37 354 aa11.79□□□□□ -0.52
TRIM60P16-201ENST00000444048 SHROOM4Q9ULL8 1493 aa11.74□□□□□ -0.53
TRIM60P16-201ENST00000444048 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
TRIM60P16-201ENST00000444048 HAX1O00165 279 aa11.7□□□□□ -0.54
TRIM60P16-201ENST00000444048 UNC13AQ9UPW8 1703 aa11.67□□□□□ -0.54
TRIM60P16-201ENST00000444048 MIER1Q8N108 512 aa11.66□□□□□ -0.54
TRIM60P16-201ENST00000444048 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
TRIM60P16-201ENST00000444048 MNX1P50219 401 aaPredicted RBP11.64□□□□□ -0.55
TRIM60P16-201ENST00000444048 EVX2Q03828 476 aa11.63□□□□□ -0.55
TRIM60P16-201ENST00000444048 BICRAQ9NZM4 1560 aa11.62□□□□□ -0.55
TRIM60P16-201ENST00000444048 C19orf67A6NJJ6 358 aa11.62□□□□□ -0.55
TRIM60P16-201ENST00000444048 SCRIBQ14160 1630 aa11.61□□□□□ -0.55
TRIM60P16-201ENST00000444048 PLCD3Q8N3E9 789 aa11.6□□□□□ -0.55
TRIM60P16-201ENST00000444048 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
TRIM60P16-201ENST00000444048 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRIM60P16-201ENST00000444048 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms