Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PCDHA3Q9Y5H8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 AC080038.1-201ENST00000611274 1154 ntBASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 AC092437.1-201ENST00000624794 1048 ntBASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA3Q9Y5H8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 AL050303.2-201ENST00000619798 666 ntBASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 AC073111.5-205ENST00000641717 521 ntBASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHA3Q9Y5H8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA3Q9Y5H8 MKRN4P-201ENST00000444706 1521 ntBASIC20.52■□□□□ 0.87
PCDHA3Q9Y5H8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHA3Q9Y5H8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHA3Q9Y5H8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHA3Q9Y5H8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHA3Q9Y5H8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 CDCA4P2-201ENST00000441182 718 ntBASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA3Q9Y5H8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms