Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH1Q9Y2L9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 AL355001.2-201ENST00000620617 1191 ntBASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH1Q9Y2L9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRCH1Q9Y2L9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRCH1Q9Y2L9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRCH1Q9Y2L9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 AC142381.2-201ENST00000566120 298 ntBASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 AC067852.2-201ENST00000590513 2313 ntBASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH1Q9Y2L9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 AC006333.2-201ENST00000607957 2099 ntBASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH1Q9Y2L9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 AC006455.2-201ENST00000429931 906 ntBASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 MIR4767-201ENST00000582827 78 ntBASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRCH1Q9Y2L9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms