Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 AC097488.1-201ENST00000507834 756 ntBASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 C2orf69P3-201ENST00000565542 1120 ntBASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DNMT3BQ9UBC3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 CRYGFP-201ENST00000418459 633 ntBASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.55■□□□□ 0.88
DNMT3BQ9UBC3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 SMG8-203ENST00000578922 2178 ntBASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 TSPY14P-201ENST00000303979 915 ntBASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 ECEL1P2-202ENST00000465689 757 ntBASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 DUX4L26-201ENST00000489078 1255 ntBASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 EGLN1P1-201ENST00000531623 762 ntBASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 AC130371.2-201ENST00000619443 611 ntBASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DNMT3BQ9UBC3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 HLA-A-209ENST00000638375 975 ntBASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.53■□□□□ 0.88
DNMT3BQ9UBC3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 INGX-201ENST00000359239 846 ntBASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 AC008040.2-201ENST00000461049 708 ntBASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3BQ9UBC3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
DNMT3BQ9UBC3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.52■□□□□ 0.87
DNMT3BQ9UBC3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
DNMT3BQ9UBC3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
DNMT3BQ9UBC3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms