Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.31■□□□□ 0.52
RLIMQ9NVW2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 HLA-G-202ENST00000376815 851 ntBASIC18.3■□□□□ 0.52
RLIMQ9NVW2 HLA-G-203ENST00000376818 1127 ntBASIC18.3■□□□□ 0.52
RLIMQ9NVW2 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RLIMQ9NVW2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 AC009237.14-201ENST00000609975 1594 ntBASIC18.29■□□□□ 0.52
RLIMQ9NVW2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RLIMQ9NVW2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 AC093503.3-201ENST00000624917 2352 ntBASIC18.28■□□□□ 0.52
RLIMQ9NVW2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RLIMQ9NVW2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 GPX1P1-201ENST00000388829 606 ntBASIC18.27■□□□□ 0.52
RLIMQ9NVW2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 AC083906.2-201ENST00000511578 360 ntBASIC18.27■□□□□ 0.52
RLIMQ9NVW2 AC023632.3-201ENST00000521633 145 ntBASIC18.27■□□□□ 0.52
RLIMQ9NVW2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.27■□□□□ 0.52
RLIMQ9NVW2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms