Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C12orf4Q9NQ89 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
C12orf4Q9NQ89 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C12orf4Q9NQ89 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C12orf4Q9NQ89 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
C12orf4Q9NQ89 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C12orf4Q9NQ89 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.04■□□□□ 0.32
C12orf4Q9NQ89 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 AC105265.2-201ENST00000467189 838 ntBASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 AP000997.3-201ENST00000623333 2250 ntBASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.03■□□□□ 0.32
C12orf4Q9NQ89 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 FAM21FP-204ENST00000608637 956 ntBASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 AC243732.1-201ENST00000612648 864 ntBASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.02■□□□□ 0.32
C12orf4Q9NQ89 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.02■□□□□ 0.31
C12orf4Q9NQ89 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.02■□□□□ 0.31
C12orf4Q9NQ89 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.02■□□□□ 0.31
C12orf4Q9NQ89 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
C12orf4Q9NQ89 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 AC007322.3-201ENST00000426526 701 ntBASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
C12orf4Q9NQ89 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17■□□□□ 0.31
C12orf4Q9NQ89 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17■□□□□ 0.31
C12orf4Q9NQ89 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
C12orf4Q9NQ89 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
C12orf4Q9NQ89 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17■□□□□ 0.31
C12orf4Q9NQ89 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C12orf4Q9NQ89 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C12orf4Q9NQ89 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
C12orf4Q9NQ89 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C12orf4Q9NQ89 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
C12orf4Q9NQ89 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C12orf4Q9NQ89 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms