Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
ATP6V0A4Q9HBG4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
ATP6V0A4Q9HBG4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0A4Q9HBG4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0A4Q9HBG4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0A4Q9HBG4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.89■■□□□ 1.09
ATP6V0A4Q9HBG4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0A4Q9HBG4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATP6V0A4Q9HBG4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 KRT16P5-201ENST00000455284 522 ntBASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 BX088651.1-201ENST00000540551 451 ntBASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 AC004264.1-201ENST00000608354 794 ntBASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 LINC01521-201ENST00000504184 1943 ntBASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.88■■□□□ 1.09
ATP6V0A4Q9HBG4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 AL691432.2-201ENST00000607222 2038 ntBASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 MIR4785-201ENST00000585005 73 ntBASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 AP001271.2-201ENST00000624018 1556 ntBASIC21.87■■□□□ 1.09
ATP6V0A4Q9HBG4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 AC113410.3-201ENST00000623366 203 ntBASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATP6V0A4Q9HBG4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.85■■□□□ 1.09
ATP6V0A4Q9HBG4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms