Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS11Q9H270 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.76■□□□□ 0.75
VPS11Q9H270 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.76■□□□□ 0.75
VPS11Q9H270 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS11Q9H270 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS11Q9H270 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS11Q9H270 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS11Q9H270 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.76■□□□□ 0.75
VPS11Q9H270 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.76■□□□□ 0.75
VPS11Q9H270 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VPS11Q9H270 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS11Q9H270 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS11Q9H270 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
VPS11Q9H270 LINC01465-201ENST00000408887 1940 ntBASIC19.76■□□□□ 0.75
VPS11Q9H270 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.76■□□□□ 0.75
VPS11Q9H270 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS11Q9H270 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS11Q9H270 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS11Q9H270 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.75■□□□□ 0.75
VPS11Q9H270 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS11Q9H270 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS11Q9H270 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS11Q9H270 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VPS11Q9H270 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 RARRES2P4-201ENST00000514074 484 ntBASIC19.75■□□□□ 0.75
VPS11Q9H270 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.75■□□□□ 0.75
VPS11Q9H270 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 AL031963.3-201ENST00000606441 850 ntBASIC19.75■□□□□ 0.75
VPS11Q9H270 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VPS11Q9H270 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.75■□□□□ 0.75
VPS11Q9H270 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 AL138781.2-201ENST00000617896 1843 ntBASIC19.74■□□□□ 0.75
VPS11Q9H270 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
VPS11Q9H270 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS11Q9H270 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 MFSD11-216ENST00000590393 1141 ntBASIC19.74■□□□□ 0.75
VPS11Q9H270 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 KRT8P20-201ENST00000423953 1409 ntBASIC19.74■□□□□ 0.75
VPS11Q9H270 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS11Q9H270 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS11Q9H270 NEFHP1-201ENST00000412845 2629 ntBASIC19.73■□□□□ 0.75
VPS11Q9H270 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS11Q9H270 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS11Q9H270 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS11Q9H270 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS11Q9H270 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
VPS11Q9H270 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS11Q9H270 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS11Q9H270 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS11Q9H270 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
VPS11Q9H270 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS11Q9H270 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS11Q9H270 AC087623.3-201ENST00000607047 1098 ntBASIC19.73■□□□□ 0.75
VPS11Q9H270 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS11Q9H270 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS11Q9H270 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS11Q9H270 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS11Q9H270 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS11Q9H270 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS11Q9H270 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS11Q9H270 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.72■□□□□ 0.75
VPS11Q9H270 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS11Q9H270 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.72■□□□□ 0.75
VPS11Q9H270 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS11Q9H270 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
VPS11Q9H270 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS11Q9H270 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS11Q9H270 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS11Q9H270 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VPS11Q9H270 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS11Q9H270 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VPS11Q9H270 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.72■□□□□ 0.75
VPS11Q9H270 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS11Q9H270 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
VPS11Q9H270 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
VPS11Q9H270 AC100791.3-201ENST00000617619 330 ntBASIC19.72■□□□□ 0.75
VPS11Q9H270 AC105020.6-201ENST00000621523 1217 ntBASIC19.72■□□□□ 0.75
VPS11Q9H270 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.72■□□□□ 0.75
VPS11Q9H270 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS11Q9H270 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VPS11Q9H270 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.72■□□□□ 0.75
VPS11Q9H270 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS11Q9H270 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS11Q9H270 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms