Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 AC007322.3-201ENST00000426526 701 ntBASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBA1CQ9BQE3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TUBA1CQ9BQE3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.52■□□□□ 0.55
TUBA1CQ9BQE3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.52■□□□□ 0.55
TUBA1CQ9BQE3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TUBA1CQ9BQE3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
TUBA1CQ9BQE3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 AL355472.2-201ENST00000422958 438 ntBASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBA1CQ9BQE3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 TMEM179-206ENST00000616017 1645 ntBASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1CQ9BQE3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 LSM12P1-201ENST00000411836 588 ntBASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 AC100791.3-201ENST00000617619 330 ntBASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1CQ9BQE3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms