Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.88□□□□□ -0.03
VGLL1Q99990 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VGLL1Q99990 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.88□□□□□ -0.03
VGLL1Q99990 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VGLL1Q99990 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.88□□□□□ -0.03
VGLL1Q99990 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.88□□□□□ -0.03
VGLL1Q99990 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
VGLL1Q99990 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.88□□□□□ -0.03
VGLL1Q99990 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.88□□□□□ -0.03
VGLL1Q99990 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VGLL1Q99990 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VGLL1Q99990 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.88□□□□□ -0.03
VGLL1Q99990 AC007322.4-201ENST00000509611 723 ntBASIC14.88□□□□□ -0.03
VGLL1Q99990 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.88□□□□□ -0.03
VGLL1Q99990 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.88□□□□□ -0.03
VGLL1Q99990 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.88□□□□□ -0.03
VGLL1Q99990 AL031963.3-201ENST00000606441 850 ntBASIC14.88□□□□□ -0.03
VGLL1Q99990 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VGLL1Q99990 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VGLL1Q99990 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
VGLL1Q99990 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VGLL1Q99990 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VGLL1Q99990 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
VGLL1Q99990 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.87□□□□□ -0.03
VGLL1Q99990 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.87□□□□□ -0.03
VGLL1Q99990 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.87□□□□□ -0.03
VGLL1Q99990 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.87□□□□□ -0.03
VGLL1Q99990 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VGLL1Q99990 MCRIP2P1-201ENST00000394346 511 ntBASIC14.87□□□□□ -0.03
VGLL1Q99990 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VGLL1Q99990 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.87□□□□□ -0.03
VGLL1Q99990 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
VGLL1Q99990 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.87□□□□□ -0.03
VGLL1Q99990 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
VGLL1Q99990 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.87□□□□□ -0.03
VGLL1Q99990 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VGLL1Q99990 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
VGLL1Q99990 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.86□□□□□ -0.03
VGLL1Q99990 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VGLL1Q99990 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.86□□□□□ -0.03
VGLL1Q99990 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 KRT8P20-201ENST00000423953 1409 ntBASIC14.86□□□□□ -0.03
VGLL1Q99990 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.86□□□□□ -0.03
VGLL1Q99990 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.86□□□□□ -0.03
VGLL1Q99990 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.86□□□□□ -0.03
VGLL1Q99990 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.86□□□□□ -0.03
VGLL1Q99990 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.86□□□□□ -0.03
VGLL1Q99990 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VGLL1Q99990 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.86□□□□□ -0.03
VGLL1Q99990 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VGLL1Q99990 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
VGLL1Q99990 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.86□□□□□ -0.03
VGLL1Q99990 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VGLL1Q99990 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VGLL1Q99990 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
VGLL1Q99990 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.85□□□□□ -0.03
VGLL1Q99990 AL032819.2-201ENST00000624543 2162 ntBASIC14.85□□□□□ -0.03
VGLL1Q99990 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VGLL1Q99990 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VGLL1Q99990 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms