Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00479Q96M42 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00479Q96M42 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
LINC00479Q96M42 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15□□□□□ -0.01
LINC00479Q96M42 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LINC00479Q96M42 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15□□□□□ -0.01
LINC00479Q96M42 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15□□□□□ -0.01
LINC00479Q96M42 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15□□□□□ -0.01
LINC00479Q96M42 AC091305.1-201ENST00000479476 895 ntBASIC15□□□□□ -0.01
LINC00479Q96M42 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15□□□□□ -0.01
LINC00479Q96M42 AC243732.1-201ENST00000612648 864 ntBASIC15□□□□□ -0.01
LINC00479Q96M42 AL136967.2-201ENST00000623968 743 ntBASIC15□□□□□ -0.01
LINC00479Q96M42 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LINC00479Q96M42 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
LINC00479Q96M42 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15□□□□□ -0.01
LINC00479Q96M42 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15□□□□□ -0.01
LINC00479Q96M42 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00479Q96M42 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LINC00479Q96M42 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.99□□□□□ -0.01
LINC00479Q96M42 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 AL356652.1-201ENST00000615962 565 ntBASIC14.99□□□□□ -0.01
LINC00479Q96M42 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 FZD10-202ENST00000539839 3282 ntBASIC14.99□□□□□ -0.01
LINC00479Q96M42 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
LINC00479Q96M42 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00479Q96M42 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LINC00479Q96M42 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00479Q96M42 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms