Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPB3Q92617 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB3Q92617 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB3Q92617 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB3Q92617 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPB3Q92617 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPB3Q92617 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPB3Q92617 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 AC004408.2-201ENST00000623613 2777 ntBASIC15.5■□□□□ 0.07
NPIPB3Q92617 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 KRT18P5-201ENST00000436075 1291 ntBASIC15.5■□□□□ 0.07
NPIPB3Q92617 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPB3Q92617 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NPIPB3Q92617 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 AL355472.2-201ENST00000422958 438 ntBASIC15.49■□□□□ 0.07
NPIPB3Q92617 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.49■□□□□ 0.07
NPIPB3Q92617 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.49■□□□□ 0.07
NPIPB3Q92617 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.49■□□□□ 0.07
NPIPB3Q92617 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPB3Q92617 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 AL032819.2-201ENST00000624543 2162 ntBASIC15.48■□□□□ 0.07
NPIPB3Q92617 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 PHGDH-210ENST00000641115 1638 ntBASIC15.48■□□□□ 0.07
NPIPB3Q92617 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 CYP2T1P-201ENST00000432607 1285 ntBASIC15.48■□□□□ 0.07
NPIPB3Q92617 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
NPIPB3Q92617 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPIPB3Q92617 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms