Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.434e-10■■■□□ 14.8
LARP4Q71RC2 CTSA-214ENST00000606788 3056 ntTSL 215.73■□□□□ 0.114e-10■■■□□ 14.8
LARP4Q71RC2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.09■□□□□ 0.014e-10■■■□□ 14.8
LARP4Q71RC2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.17■■□□□ 1.145e-7■■■□□ 14.8
LARP4Q71RC2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.145e-7■■■□□ 14.8
LARP4Q71RC2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.13■■□□□ 1.135e-7■■■□□ 14.8
LARP4Q71RC2 C20orf24-206ENST00000492721 1044 ntTSL 219.65■□□□□ 0.745e-7■■■□□ 14.8
LARP4Q71RC2 C20orf24-204ENST00000483815 1170 ntTSL 1 (best)16.35■□□□□ 0.215e-7■■■□□ 14.8
LARP4Q71RC2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.015e-7■■■□□ 14.8
LARP4Q71RC2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.044e-9■■■□□ 14.8
LARP4Q71RC2 PIEZO1-210ENST00000491917 406 ntTSL 220.52■□□□□ 0.884e-7■■■□□ 14.8
LARP4Q71RC2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.95■□□□□ 0.624e-7■■■□□ 14.8
LARP4Q71RC2 ATF5-203ENST00000596658 722 ntTSL 217.08■□□□□ 0.324e-7■■■□□ 14.8
LARP4Q71RC2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.31e-12■■■□□ 14.8
LARP4Q71RC2 ARID3A-205ENST00000587532 1016 ntTSL 516.59■□□□□ 0.251e-12■■■□□ 14.8
LARP4Q71RC2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.143e-6■■■□□ 14.8
LARP4Q71RC2 CREB1-204ENST00000421139 713 ntTSL 515.95■□□□□ 0.144e-9■■■□□ 14.8
LARP4Q71RC2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.084e-7■■■□□ 14.8
LARP4Q71RC2 ATF5-204ENST00000597227 828 ntTSL 315.08■□□□□ 04e-7■■■□□ 14.8
LARP4Q71RC2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.014e-7■■■□□ 14.8
LARP4Q71RC2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.14□□□□□ -0.154e-7■■■□□ 14.8
LARP4Q71RC2 ARID3A-202ENST00000457152 549 ntTSL 511.91□□□□□ -0.51e-12■■■□□ 14.8
LARP4Q71RC2 LINC02327-204ENST00000550827 777 ntTSL 210.32□□□□□ -0.764e-9■■■□□ 14.8
LARP4Q71RC2 ANKRD11-207ENST00000562816 573 ntTSL 410.17□□□□□ -0.787e-7■■■□□ 14.8
LARP4Q71RC2 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.824e-9■■■□□ 14.8
LARP4Q71RC2 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC9.77□□□□□ -0.854e-9■■■□□ 14.8
LARP4Q71RC2 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.984e-9■■■□□ 14.8
LARP4Q71RC2 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC8.9□□□□□ -0.984e-7■■■□□ 14.8
LARP4Q71RC2 FANCI-211ENST00000566615 537 ntTSL 48.73□□□□□ -1.017e-7■■■□□ 14.8
LARP4Q71RC2 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.047e-7■■■□□ 14.8
LARP4Q71RC2 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC7.85□□□□□ -1.154e-7■■■□□ 14.8
LARP4Q71RC2 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.174e-9■■■□□ 14.8
LARP4Q71RC2 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.55□□□□□ -1.24e-9■■■□□ 14.8
LARP4Q71RC2 SETD5-202ENST00000399686 3362 ntTSL 57.25□□□□□ -1.254e-9■■■□□ 14.8
LARP4Q71RC2 AL034397.3-201ENST00000618234 1690 ntTSL 1 (best)6.43□□□□□ -1.384e-7■■■□□ 14.8
LARP4Q71RC2 ZNF638-224ENST00000493576 1107 ntTSL 56.22□□□□□ -1.414e-9■■■□□ 14.8
LARP4Q71RC2 ZNF638-221ENST00000488126 842 ntTSL 26.22□□□□□ -1.414e-9■■■□□ 14.8
LARP4Q71RC2 FBL-202ENST00000593503 628 ntTSL 36.13□□□□□ -1.434e-7■■■□□ 14.8
LARP4Q71RC2 FANCI-212ENST00000566895 4663 ntTSL 26.04□□□□□ -1.447e-7■■■□□ 14.8
LARP4Q71RC2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.444e-7■■■□□ 14.8
LARP4Q71RC2 ZNF638-211ENST00000461991 846 ntTSL 35.93□□□□□ -1.464e-9■■■□□ 14.8
LARP4Q71RC2 CREB1-216ENST00000494094 580 ntTSL 25.72□□□□□ -1.494e-9■■■□□ 14.8
LARP4Q71RC2 CREB1-211ENST00000452474 518 ntTSL 45.72□□□□□ -1.494e-9■■■□□ 14.8
LARP4Q71RC2 ZNF644-205ENST00000467231 851 ntTSL 35.25□□□□□ -1.574e-7■■■□□ 14.8
LARP4Q71RC2 ZNF638-215ENST00000472758 535 ntTSL 34.38□□□□□ -1.714e-9■■■□□ 14.8
LARP4Q71RC2 CREB1-207ENST00000445803 651 ntTSL 43.72□□□□□ -1.814e-9■■■□□ 14.8
LARP4Q71RC2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.96□□□□□ -1.944e-7■■■□□ 14.8
LARP4Q71RC2 FANCI-204ENST00000561894 3268 ntTSL 22.66□□□□□ -1.987e-7■■■□□ 14.8
LARP4Q71RC2 MRPL28-209ENST00000481453 2229 ntTSL 218.16■□□□□ 0.53e-7■■■□□ 14.8
LARP4Q71RC2 MRPL28-208ENST00000469744 1467 ntTSL 1 (best)16.86■□□□□ 0.293e-7■■■□□ 14.8
LARP4Q71RC2 MRPL28-210ENST00000483764 1512 ntTSL 1 (best)16.66■□□□□ 0.263e-7■■■□□ 14.8
LARP4Q71RC2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.11■□□□□ 0.173e-7■■■□□ 14.8
LARP4Q71RC2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.153e-7■■■□□ 14.8
LARP4Q71RC2 MRPL28-207ENST00000461550 1478 ntTSL 515.91■□□□□ 0.143e-7■■■□□ 14.8
LARP4Q71RC2 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.44□□□□□ -0.261e-8■■■□□ 14.8
LARP4Q71RC2 COX4I1-207ENST00000564648 1235 ntTSL 58.52□□□□□ -1.051e-8■■■□□ 14.8
LARP4Q71RC2 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.473e-12■■■□□ 14.8
LARP4Q71RC2 RPL13-212ENST00000563749 2367 nt22.04■■□□□ 1.122e-87■■■□□ 14.8
LARP4Q71RC2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.012e-87■■■□□ 14.8
LARP4Q71RC2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.99□□□□□ -0.176e-19■■■□□ 14.8
LARP4Q71RC2 RPL13-207ENST00000484610 924 ntTSL 513.92□□□□□ -0.182e-87■■■□□ 14.8
LARP4Q71RC2 RPL13-210ENST00000562879 958 ntTSL 1 (best)13.85□□□□□ -0.196e-19■■■□□ 14.8
LARP4Q71RC2 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.536e-19■■■□□ 14.8
LARP4Q71RC2 NDUFB8-204ENST00000464651 390 ntTSL 210.09□□□□□ -0.793e-12■■■□□ 14.8
LARP4Q71RC2 HLA-C-208ENST00000487245 1880 nt26.09■■□□□ 1.774e-7■■■□□ 14.7
LARP4Q71RC2 HLA-C-202ENST00000376237 1538 nt21.89■■□□□ 1.094e-7■■■□□ 14.7
LARP4Q71RC2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.94e-7■■■□□ 14.7
LARP4Q71RC2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.6■□□□□ 0.894e-7■■■□□ 14.7
LARP4Q71RC2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.843e-7■■■□□ 14.7
LARP4Q71RC2 EIF4EBP1-202ENST00000520657 695 ntTSL 310.77□□□□□ -0.693e-7■■■□□ 14.7
LARP4Q71RC2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.386e-7■■■□□ 14.7
LARP4Q71RC2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.6■□□□□ 0.256e-7■■■□□ 14.7
LARP4Q71RC2 CALM2-203ENST00000432899 1004 ntTSL 512.17□□□□□ -0.466e-7■■■□□ 14.7
LARP4Q71RC2 STPG4-206ENST00000422269 983 ntTSL 210.79□□□□□ -0.686e-7■■■□□ 14.7
LARP4Q71RC2 CALM2-204ENST00000456319 703 ntTSL 26.87□□□□□ -1.316e-7■■■□□ 14.7
LARP4Q71RC2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.371e-13■■■□□ 14.7
LARP4Q71RC2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.17■□□□□ 0.51e-13■■■□□ 14.7
LARP4Q71RC2 AC097637.1-201ENST00000494383 3695 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.611e-13■■■□□ 14.7
LARP4Q71RC2 AC097637.1-202ENST00000478201 570 ntTSL 29.84□□□□□ -0.831e-13■■■□□ 14.7
LARP4Q71RC2 AMBP-203ENST00000540645 1356 ntTSL 211.98□□□□□ -0.493e-46■■■□□ 14.7
LARP4Q71RC2 TTR-204ENST00000610404 1040 ntTSL 5 BASIC7.82□□□□□ -1.169e-11■■■□□ 14.7
LARP4Q71RC2 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.349e-11■■■□□ 14.7
LARP4Q71RC2 ATP5B-208ENST00000551182 457 ntTSL 26.57□□□□□ -1.365e-35■■■□□ 14.7
LARP4Q71RC2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.936e-12■■■□□ 14.7
LARP4Q71RC2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.63■□□□□ 0.416e-12■■■□□ 14.7
LARP4Q71RC2 AP005263.1-202ENST00000578850 198 ntTSL 217.63■□□□□ 0.416e-12■■■□□ 14.7
LARP4Q71RC2 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.07□□□□□ -1.286e-12■■■□□ 14.7
LARP4Q71RC2 NDUFV2-203ENST00000465096 643 ntTSL 25.65□□□□□ -1.56e-12■■■□□ 14.7
LARP4Q71RC2 NDUFV2-205ENST00000474740 264 ntTSL 23.68□□□□□ -1.826e-12■■■□□ 14.7
LARP4Q71RC2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.033e-7■■■□□ 14.7
LARP4Q71RC2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.09■■□□□ 1.133e-7■■■□□ 14.7
LARP4Q71RC2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.07■■□□□ 1.123e-6■■■□□ 14.7
LARP4Q71RC2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.013e-6■■■□□ 14.7
LARP4Q71RC2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.13■□□□□ 0.973e-6■■■□□ 14.7
LARP4Q71RC2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.54■□□□□ 0.563e-6■■■□□ 14.7
LARP4Q71RC2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.533e-6■■■□□ 14.7
LARP4Q71RC2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.393e-7■■■□□ 14.7
LARP4Q71RC2 SYVN1-212ENST00000530451 656 ntTSL 517.47■□□□□ 0.393e-7■■■□□ 14.7
LARP4Q71RC2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.36■□□□□ 0.374e-10■■■□□ 14.7
LARP4Q71RC2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.08■□□□□ 0.333e-7■■■□□ 14.7
Retrieved 100 of 15,922 protein–RNA pairs in 505.4 ms