Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.57■□□□□ 0.56
RUNDC3AQ59EK9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 AC138932.1-201ENST00000534164 6830 ntBASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 AL355472.2-201ENST00000422958 438 ntBASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 AC137761.2-201ENST00000561729 223 ntBASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 AC145350.3-201ENST00000569033 163 ntBASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RUNDC3AQ59EK9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RUNDC3AQ59EK9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 C2orf69P4-201ENST00000565394 541 ntBASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RUNDC3AQ59EK9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
RUNDC3AQ59EK9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms