Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 CYP2T3P-201ENST00000601990 817 ntBASIC18.88■□□□□ 0.61
PDCD4Q53EL6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.88■□□□□ 0.61
PDCD4Q53EL6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 AC023632.3-201ENST00000521633 145 ntBASIC18.87■□□□□ 0.61
PDCD4Q53EL6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.87■□□□□ 0.61
PDCD4Q53EL6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PDCD4Q53EL6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 AC093503.3-201ENST00000624917 2352 ntBASIC18.86■□□□□ 0.61
PDCD4Q53EL6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD4Q53EL6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 DUX4L16-201ENST00000555130 1264 ntBASIC18.85■□□□□ 0.61
PDCD4Q53EL6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 AC137761.2-201ENST00000561729 223 ntBASIC18.85■□□□□ 0.61
PDCD4Q53EL6 AC145350.3-201ENST00000569033 163 ntBASIC18.85■□□□□ 0.61
PDCD4Q53EL6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD4Q53EL6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD4Q53EL6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms