Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HMGCS1Q01581 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS1Q01581 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS1Q01581 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HMGCS1Q01581 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCS1Q01581 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCS1Q01581 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCS1Q01581 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 MIPEPP3-201ENST00000412105 444 ntBASIC18.93■□□□□ 0.62
HMGCS1Q01581 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.93■□□□□ 0.62
HMGCS1Q01581 AC083906.2-201ENST00000511578 360 ntBASIC18.93■□□□□ 0.62
HMGCS1Q01581 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 AP000974.1-201ENST00000623909 2387 ntBASIC18.93■□□□□ 0.62
HMGCS1Q01581 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCS1Q01581 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCS1Q01581 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCS1Q01581 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCS1Q01581 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCS1Q01581 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCS1Q01581 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGCS1Q01581 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGCS1Q01581 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 AC018553.1-201ENST00000616682 1458 ntBASIC18.92■□□□□ 0.62
HMGCS1Q01581 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HMGCS1Q01581 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HMGCS1Q01581 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGCS1Q01581 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HMGCS1Q01581 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGCS1Q01581 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCS1Q01581 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
HMGCS1Q01581 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
HMGCS1Q01581 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
HMGCS1Q01581 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS1Q01581 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS1Q01581 Z82202.1-201ENST00000623446 1880 ntBASIC18.91■□□□□ 0.62
HMGCS1Q01581 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 AL121832.2-201ENST00000610979 668 ntBASIC18.91■□□□□ 0.62
HMGCS1Q01581 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS1Q01581 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS1Q01581 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS1Q01581 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS1Q01581 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS1Q01581 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGCS1Q01581 AIRN-201ENST00000601203 4374 ntBASIC18.91■□□□□ 0.62
HMGCS1Q01581 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS1Q01581 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS1Q01581 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 DUSP5P2-201ENST00000426873 1033 ntBASIC18.9■□□□□ 0.62
HMGCS1Q01581 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCS1Q01581 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS1Q01581 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.9■□□□□ 0.62
HMGCS1Q01581 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms