Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RPS4XP62701 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4XP62701 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPS4XP62701 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RPS4XP62701 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPS4XP62701 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RPS4XP62701 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPS4XP62701 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RPS4XP62701 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4XP62701 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RPS4XP62701 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4XP62701 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4XP62701 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4XP62701 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.76■□□□□ 0.43
RPS4XP62701 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4XP62701 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.76■□□□□ 0.43
RPS4XP62701 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4XP62701 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.76■□□□□ 0.43
RPS4XP62701 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.76■□□□□ 0.43
RPS4XP62701 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.76■□□□□ 0.43
RPS4XP62701 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4XP62701 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4XP62701 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
RPS4XP62701 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RPS4XP62701 AC116351.2-201ENST00000606540 1585 ntBASIC17.75■□□□□ 0.43
RPS4XP62701 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
RPS4XP62701 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4XP62701 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4XP62701 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4XP62701 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4XP62701 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4XP62701 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.75■□□□□ 0.43
RPS4XP62701 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.75■□□□□ 0.43
RPS4XP62701 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4XP62701 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.75■□□□□ 0.43
RPS4XP62701 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.75■□□□□ 0.43
RPS4XP62701 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.75■□□□□ 0.43
RPS4XP62701 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.75■□□□□ 0.43
RPS4XP62701 AC006058.3-201ENST00000606217 1069 ntBASIC17.75■□□□□ 0.43
RPS4XP62701 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4XP62701 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RPS4XP62701 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
RPS4XP62701 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4XP62701 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
RPS4XP62701 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4XP62701 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.75■□□□□ 0.43
RPS4XP62701 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RPS4XP62701 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RPS4XP62701 BX323043.1-201ENST00000641006 1765 ntBASIC17.74■□□□□ 0.43
RPS4XP62701 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.74■□□□□ 0.43
RPS4XP62701 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.74■□□□□ 0.43
RPS4XP62701 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RPS4XP62701 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.74■□□□□ 0.43
RPS4XP62701 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.74■□□□□ 0.43
RPS4XP62701 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.74■□□□□ 0.43
RPS4XP62701 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.74■□□□□ 0.43
RPS4XP62701 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.74■□□□□ 0.43
RPS4XP62701 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.74■□□□□ 0.43
RPS4XP62701 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
RPS4XP62701 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4XP62701 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.73■□□□□ 0.43
RPS4XP62701 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.73■□□□□ 0.43
RPS4XP62701 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS4XP62701 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS4XP62701 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS4XP62701 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
RPS4XP62701 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS4XP62701 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.73■□□□□ 0.43
RPS4XP62701 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS4XP62701 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 RPS2P52-201ENST00000469610 820 ntBASIC17.73■□□□□ 0.43
RPS4XP62701 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RPS4XP62701 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4XP62701 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.73■□□□□ 0.43
RPS4XP62701 AC018553.1-201ENST00000616682 1458 ntBASIC17.73■□□□□ 0.43
RPS4XP62701 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS4XP62701 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.73■□□□□ 0.43
RPS4XP62701 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RPS4XP62701 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms