Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN20P56880 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN20P56880 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN20P56880 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN20P56880 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN20P56880 AC073648.6-201ENST00000641589 218 ntBASIC18.02■□□□□ 0.48
CLDN20P56880 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLDN20P56880 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLDN20P56880 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN20P56880 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN20P56880 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN20P56880 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN20P56880 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN20P56880 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
CLDN20P56880 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN20P56880 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN20P56880 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN20P56880 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN20P56880 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN20P56880 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 PRORSD1P-201ENST00000295112 541 ntBASIC18.01■□□□□ 0.47
CLDN20P56880 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN20P56880 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN20P56880 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN20P56880 AL031963.3-201ENST00000606441 850 ntBASIC18.01■□□□□ 0.47
CLDN20P56880 AC120498.8-201ENST00000614275 531 ntBASIC18.01■□□□□ 0.47
CLDN20P56880 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN20P56880 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN20P56880 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN20P56880 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN20P56880 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN20P56880 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CLDN20P56880 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.01■□□□□ 0.47
CLDN20P56880 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLDN20P56880 AC112907.3-201ENST00000577781 2400 ntBASIC18■□□□□ 0.47
CLDN20P56880 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 KRT8P20-201ENST00000423953 1409 ntBASIC18■□□□□ 0.47
CLDN20P56880 KRT8P17-201ENST00000453110 1448 ntBASIC18■□□□□ 0.47
CLDN20P56880 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLDN20P56880 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLDN20P56880 HLA-G-202ENST00000376815 851 ntBASIC18■□□□□ 0.47
CLDN20P56880 HLA-G-203ENST00000376818 1127 ntBASIC18■□□□□ 0.47
CLDN20P56880 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 POM121L13P-201ENST00000422362 380 ntBASIC18■□□□□ 0.47
CLDN20P56880 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18■□□□□ 0.47
CLDN20P56880 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18■□□□□ 0.47
CLDN20P56880 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 AC233263.1-201ENST00000578059 224 ntBASIC18■□□□□ 0.47
CLDN20P56880 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLDN20P56880 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18■□□□□ 0.47
CLDN20P56880 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN20P56880 AC116562.4-201ENST00000641316 2276 ntBASIC18■□□□□ 0.47
CLDN20P56880 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.99■□□□□ 0.47
CLDN20P56880 AC026471.1-201ENST00000564629 3026 ntBASIC17.99■□□□□ 0.47
CLDN20P56880 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLDN20P56880 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN20P56880 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN20P56880 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 KRT17P3-201ENST00000420566 1262 ntBASIC17.99■□□□□ 0.47
CLDN20P56880 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.99■□□□□ 0.47
CLDN20P56880 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLDN20P56880 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 TNXA-203ENST00000507684 2038 ntBASIC17.99■□□□□ 0.47
CLDN20P56880 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLDN20P56880 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN20P56880 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN20P56880 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN20P56880 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLDN20P56880 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN20P56880 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLDN20P56880 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms