Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CDH6P55285 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDH6P55285 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH6P55285 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH6P55285 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH6P55285 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CDH6P55285 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH6P55285 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH6P55285 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CDH6P55285 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH6P55285 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDH6P55285 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
CDH6P55285 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH6P55285 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.46■□□□□ 0.87
CDH6P55285 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.46■□□□□ 0.87
CDH6P55285 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH6P55285 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.46■□□□□ 0.87
CDH6P55285 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDH6P55285 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH6P55285 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH6P55285 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH6P55285 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH6P55285 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH6P55285 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH6P55285 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CDH6P55285 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH6P55285 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH6P55285 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH6P55285 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH6P55285 AC007952.6-201ENST00000573168 2673 ntBASIC20.45■□□□□ 0.86
CDH6P55285 AC003957.1-201ENST00000625108 2673 ntBASIC20.45■□□□□ 0.86
CDH6P55285 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH6P55285 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CDH6P55285 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH6P55285 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH6P55285 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH6P55285 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH6P55285 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.45■□□□□ 0.86
CDH6P55285 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.45■□□□□ 0.86
CDH6P55285 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.45■□□□□ 0.86
CDH6P55285 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.45■□□□□ 0.86
CDH6P55285 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.45■□□□□ 0.86
CDH6P55285 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.45■□□□□ 0.86
CDH6P55285 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.45■□□□□ 0.86
CDH6P55285 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.45■□□□□ 0.86
CDH6P55285 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH6P55285 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.45■□□□□ 0.86
CDH6P55285 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH6P55285 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH6P55285 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH6P55285 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH6P55285 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH6P55285 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH6P55285 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.44■□□□□ 0.86
CDH6P55285 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH6P55285 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 RPS2P52-201ENST00000469610 820 ntBASIC20.44■□□□□ 0.86
CDH6P55285 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDH6P55285 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH6P55285 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CDH6P55285 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH6P55285 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDH6P55285 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH6P55285 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDH6P55285 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH6P55285 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDH6P55285 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH6P55285 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.43■□□□□ 0.86
CDH6P55285 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.43■□□□□ 0.86
CDH6P55285 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH6P55285 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CDH6P55285 TFP1-202ENST00000475455 1573 ntBASIC20.43■□□□□ 0.86
CDH6P55285 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH6P55285 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH6P55285 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.43■□□□□ 0.86
CDH6P55285 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH6P55285 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDH6P55285 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH6P55285 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDH6P55285 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH6P55285 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH6P55285 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH6P55285 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH6P55285 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH6P55285 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH6P55285 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDH6P55285 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH6P55285 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH6P55285 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms