Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.91□□□□□ -0.188e-8■■□□□ 14.5
NCBP2P52298 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.218e-8■■□□□ 14.5
NCBP2P52298 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.538e-8■■□□□ 14.5
NCBP2P52298 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.568e-8■■□□□ 14.5
NCBP2P52298 ANP32B-202ENST00000473205 687 ntTSL 311.36□□□□□ -0.598e-8■■□□□ 14.5
NCBP2P52298 PPIL2-204ENST00000417788 4213 ntTSL 29.6□□□□□ -0.878e-8■■□□□ 14.5
NCBP2P52298 CPNE7-205ENST00000529800 519 ntTSL 58.89□□□□□ -0.998e-8■■□□□ 14.5
NCBP2P52298 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.998e-8■■□□□ 14.5
NCBP2P52298 MAT2A-206ENST00000490878 565 ntTSL 31.89□□□□□ -2.118e-8■■□□□ 14.5
NCBP2P52298 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.84■□□□□ 0.938e-7■■□□□ 14.5
NCBP2P52298 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.69■■□□□ 1.063e-10■■□□□ 14.5
NCBP2P52298 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.22■□□□□ 0.513e-10■■□□□ 14.5
NCBP2P52298 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.363e-10■■□□□ 14.5
NCBP2P52298 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.79■□□□□ 0.283e-10■■□□□ 14.5
NCBP2P52298 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.33e-10■■□□□ 14.5
NCBP2P52298 NDUFA10-213ENST00000497536 563 ntTSL 212.21□□□□□ -0.453e-10■■□□□ 14.5
NCBP2P52298 NDUFA10-212ENST00000485344 4509 ntTSL 211.57□□□□□ -0.563e-10■■□□□ 14.5
NCBP2P52298 NDUFA10-207ENST00000443626 776 ntTSL 510.8□□□□□ -0.683e-10■■□□□ 14.5
NCBP2P52298 NDUFA10-205ENST00000414580 562 ntTSL 48.35□□□□□ -1.073e-10■■□□□ 14.5
NCBP2P52298 ASPSCR1-204ENST00000577733 5503 ntTSL 216.53■□□□□ 0.241e-7■■□□□ 14.5
NCBP2P52298 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.11■□□□□ 0.171e-14■■□□□ 14.5
NCBP2P52298 CSNK2A1-209ENST00000609606 589 ntTSL 213.91□□□□□ -0.181e-14■■□□□ 14.5
NCBP2P52298 CSNK2A1-206ENST00000608066 577 ntTSL 413.91□□□□□ -0.181e-14■■□□□ 14.5
NCBP2P52298 CSNK2A1-205ENST00000460062 552 ntTSL 413.91□□□□□ -0.181e-14■■□□□ 14.5
NCBP2P52298 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.951e-14■■□□□ 14.5
NCBP2P52298 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.081e-14■■□□□ 14.5
NCBP2P52298 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.26□□□□□ -1.411e-14■■□□□ 14.5
NCBP2P52298 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.366e-7■■□□□ 14.5
NCBP2P52298 AC009053.1-205ENST00000568371 734 ntTSL 216.74■□□□□ 0.273e-9■■□□□ 14.5
NCBP2P52298 C19orf48-216ENST00000641834 1718 nt16.56■□□□□ 0.246e-7■■□□□ 14.5
NCBP2P52298 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.016e-7■■□□□ 14.5
NCBP2P52298 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.1■□□□□ 0.013e-9■■□□□ 14.5
NCBP2P52298 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.29□□□□□ -0.123e-9■■□□□ 14.5
NCBP2P52298 C19orf48-203ENST00000593287 578 ntTSL 512.94□□□□□ -0.346e-7■■□□□ 14.5
NCBP2P52298 C19orf48-209ENST00000597705 892 ntTSL 311.64□□□□□ -0.556e-7■■□□□ 14.5
NCBP2P52298 C19orf48-208ENST00000597493 971 ntTSL 211.37□□□□□ -0.596e-7■■□□□ 14.5
NCBP2P52298 C19orf48-214ENST00000602125 292 ntTSL 54.73□□□□□ -1.656e-7■■□□□ 14.5
NCBP2P52298 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.18■□□□□ 0.343e-6■■□□□ 14.5
NCBP2P52298 BMS1P4-203ENST00000580790 1913 ntTSL 1 (best) BASIC9.5□□□□□ -0.893e-6■■□□□ 14.5
NCBP2P52298 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC7.99□□□□□ -1.133e-6■■□□□ 14.5
NCBP2P52298 CCNT2-204ENST00000419781 5414 ntTSL 1 (best)14.9□□□□□ -0.023e-14■■□□□ 14.5
NCBP2P52298 CCNT2-206ENST00000446247 663 ntTSL 514.46□□□□□ -0.093e-14■■□□□ 14.5
NCBP2P52298 CCNT2-210ENST00000475094 606 ntTSL 213.22□□□□□ -0.293e-14■■□□□ 14.5
NCBP2P52298 CCNT2-203ENST00000417175 811 ntTSL 312.16□□□□□ -0.463e-14■■□□□ 14.5
NCBP2P52298 CCNT2-208ENST00000452839 2363 ntTSL 210.7□□□□□ -0.73e-14■■□□□ 14.5
NCBP2P52298 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.78□□□□□ -1.163e-14■■□□□ 14.5
NCBP2P52298 CCNT2-209ENST00000464932 723 ntTSL 34.38□□□□□ -1.713e-14■■□□□ 14.5
NCBP2P52298 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.753e-14■■□□□ 14.5
NCBP2P52298 AP3D1-209ENST00000591284 580 ntTSL 517.4■□□□□ 0.383e-6■■□□□ 14.5
NCBP2P52298 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.23e-6■■□□□ 14.5
NCBP2P52298 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.193e-6■■□□□ 14.5
NCBP2P52298 USP8-208ENST00000559329 1917 ntTSL 1 (best)15.07■□□□□ 01e-8■■□□□ 14.5
NCBP2P52298 USP8-206ENST00000558892 616 ntTSL 512.95□□□□□ -0.341e-8■■□□□ 14.5
NCBP2P52298 USP8-215ENST00000560982 410 ntTSL 312.65□□□□□ -0.381e-8■■□□□ 14.5
NCBP2P52298 USP8-219ENST00000625664 1568 ntTSL 5 BASIC11.56□□□□□ -0.561e-8■■□□□ 14.5
NCBP2P52298 USP8-209ENST00000560297 652 ntTSL 511.45□□□□□ -0.581e-8■■□□□ 14.5
NCBP2P52298 USP8-214ENST00000560954 582 ntTSL 511.37□□□□□ -0.591e-8■■□□□ 14.5
NCBP2P52298 USP8-212ENST00000560730 1449 ntTSL 1 (best)11.15□□□□□ -0.621e-8■■□□□ 14.5
NCBP2P52298 USP8-213ENST00000560885 525 ntTSL 55.68□□□□□ -1.51e-8■■□□□ 14.5
NCBP2P52298 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.621e-8■■□□□ 14.5
NCBP2P52298 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.66□□□□□ -1.661e-8■■□□□ 14.5
NCBP2P52298 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.681e-8■■□□□ 14.5
NCBP2P52298 USP8-217ENST00000561211 609 ntTSL 52.42□□□□□ -2.021e-8■■□□□ 14.5
NCBP2P52298 MAP4K5-204ENST00000554273 484 ntTSL 321.84■■□□□ 1.093e-7■■□□□ 14.5
NCBP2P52298 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.023e-7■■□□□ 14.5
NCBP2P52298 SPRY1-206ENST00000515726 849 ntTSL 221.31■■□□□ 13e-7■■□□□ 14.5
NCBP2P52298 ZFX-207ENST00000459724 673 ntTSL 521.21■□□□□ 0.992e-10■■□□□ 14.5
NCBP2P52298 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.913e-7■■□□□ 14.5
NCBP2P52298 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.873e-7■■□□□ 14.5
NCBP2P52298 KPTN-209ENST00000602193 588 ntTSL 420.06■□□□□ 0.83e-7■■□□□ 14.5
NCBP2P52298 STX5-207ENST00000491231 1719 ntTSL 519.98■□□□□ 0.793e-7■■□□□ 14.5
NCBP2P52298 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.81■□□□□ 0.763e-7■■□□□ 14.5
NCBP2P52298 KPTN-205ENST00000595554 806 ntTSL 319.03■□□□□ 0.643e-7■■□□□ 14.5
NCBP2P52298 KPTN-203ENST00000594208 1623 ntTSL 218.66■□□□□ 0.583e-7■■□□□ 14.5
NCBP2P52298 STX5-208ENST00000492066 1627 ntTSL 518.52■□□□□ 0.563e-7■■□□□ 14.5
NCBP2P52298 B3GALNT2-206ENST00000494378 1869 ntTSL 218.48■□□□□ 0.553e-7■■□□□ 14.5
NCBP2P52298 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.18■□□□□ 0.53e-7■■□□□ 14.5
NCBP2P52298 STX5-205ENST00000486437 560 ntTSL 418.04■□□□□ 0.483e-7■■□□□ 14.5
NCBP2P52298 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.8■□□□□ 0.443e-7■■□□□ 14.5
NCBP2P52298 SDHAF2-207ENST00000542794 1077 ntTSL 217.61■□□□□ 0.413e-7■■□□□ 14.5
NCBP2P52298 AP003108.2-202ENST00000541135 580 ntAPPRIS P1 TSL 417.51■□□□□ 0.393e-7■■□□□ 14.5
NCBP2P52298 SPRY1-203ENST00000505319 641 ntTSL 316.94■□□□□ 0.33e-7■■□□□ 14.5
NCBP2P52298 STX5-206ENST00000488303 604 ntTSL 515.23■□□□□ 0.033e-7■■□□□ 14.5
NCBP2P52298 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.023e-7■■□□□ 14.5
NCBP2P52298 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.033e-7■■□□□ 14.5
NCBP2P52298 AP003108.2-206ENST00000544801 875 ntTSL 514.85□□□□□ -0.033e-7■■□□□ 14.5
NCBP2P52298 KPTN-204ENST00000595484 638 ntTSL 314.85□□□□□ -0.033e-7■■□□□ 14.5
NCBP2P52298 ZNF37A-205ENST00000498773 471 ntTSL 314.23□□□□□ -0.133e-7■■□□□ 14.5
NCBP2P52298 AP003108.2-207ENST00000544880 591 ntTSL 414.16□□□□□ -0.143e-7■■□□□ 14.5
NCBP2P52298 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.173e-7■■□□□ 14.5
NCBP2P52298 ZNF37A-204ENST00000479469 1148 ntTSL 513.27□□□□□ -0.293e-7■■□□□ 14.5
NCBP2P52298 KPTN-207ENST00000600271 743 ntTSL 512.99□□□□□ -0.333e-7■■□□□ 14.5
NCBP2P52298 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.75□□□□□ -0.373e-7■■□□□ 14.5
NCBP2P52298 ZNF37A-206ENST00000638053 4448 ntTSL 5 BASIC11.52□□□□□ -0.573e-7■■□□□ 14.5
NCBP2P52298 AP003108.2-204ENST00000623232 6012 nt9.78□□□□□ -0.843e-7■■□□□ 14.5
NCBP2P52298 ENTPD1-AS1-204ENST00000427846 749 ntTSL 29.51□□□□□ -0.892e-10■■□□□ 14.5
NCBP2P52298 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.913e-7■■□□□ 14.5
NCBP2P52298 SDHAF2-204ENST00000536250 659 ntTSL 39.32□□□□□ -0.923e-7■■□□□ 14.5
NCBP2P52298 ENTPD1-AS1-209ENST00000452728 858 ntTSL 3 BASIC9.07□□□□□ -0.962e-10■■□□□ 14.5
NCBP2P52298 AP003108.2-201ENST00000544025 563 ntTSL 48.3□□□□□ -1.083e-7■■□□□ 14.5
Retrieved 100 of 18,329 protein–RNA pairs in 172.2 ms