RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
USP8-217ENST00000561211 CHIC1Q5VXU3 224 aa18.67■□□□□ 0.58
USP8-217ENST00000561211 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
USP8-217ENST00000561211 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
USP8-217ENST00000561211 FOXD1Q16676 465 aa15.6■□□□□ 0.09
USP8-217ENST00000561211 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
USP8-217ENST00000561211 PPP6R1Q9UPN7 881 aa14.62□□□□□ -0.07
USP8-217ENST00000561211 PIAS4Q8N2W9 510 aaPredicted RBP14.6□□□□□ -0.07
USP8-217ENST00000561211 MSH5O43196 834 aa14.58□□□□□ -0.08
USP8-217ENST00000561211 ADRA2BP18089 450 aa14.57□□□□□ -0.08
USP8-217ENST00000561211 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
USP8-217ENST00000561211 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
USP8-217ENST00000561211 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
USP8-217ENST00000561211 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
USP8-217ENST00000561211 PPP4R3CPQ6ZMV5 832 aa13.09□□□□□ -0.31
USP8-217ENST00000561211 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
USP8-217ENST00000561211 HOXD11P31277 338 aaPredicted RBP12.79□□□□□ -0.36
USP8-217ENST00000561211 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
USP8-217ENST00000561211 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
USP8-217ENST00000561211 NCBP3Q53F19 620 aaKnown RBP12.59□□□□□ -0.39
USP8-217ENST00000561211 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
USP8-217ENST00000561211 RNF39Q9H2S5 420 aa12.45□□□□□ -0.42
USP8-217ENST00000561211 NPM3O75607 178 aaKnown RBP12.44□□□□□ -0.42
USP8-217ENST00000561211 DNAJC5BQ9UF47 199 aa12.33□□□□□ -0.44
USP8-217ENST00000561211 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
USP8-217ENST00000561211 KCNA4P22459 653 aa12.23□□□□□ -0.45
USP8-217ENST00000561211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.2□□□□□ -0.468e-7■■□□□ 12.8
USP8-217ENST00000561211 U3KPZ7 1027 aaPredicted RBP11.96□□□□□ -0.49
USP8-217ENST00000561211 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
USP8-217ENST00000561211 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
USP8-217ENST00000561211 CAPN15O75808 1086 aa11.75□□□□□ -0.53
USP8-217ENST00000561211 DSG3P32926 999 aa11.67□□□□□ -0.54
USP8-217ENST00000561211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
USP8-217ENST00000561211 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
USP8-217ENST00000561211 APLP2Q06481 763 aa11.6□□□□□ -0.55
USP8-217ENST00000561211 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
USP8-217ENST00000561211 SAMD1Q6SPF0 538 aaPredicted RBP11.55□□□□□ -0.56
USP8-217ENST00000561211 ZNF219Q9P2Y4 722 aaPredicted RBP11.55□□□□□ -0.56
USP8-217ENST00000561211 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
USP8-217ENST00000561211 ABCB7O75027 752 aa11.5□□□□□ -0.57
USP8-217ENST00000561211 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
USP8-217ENST00000561211 FOXD4L1Q9NU39 408 aa11.39□□□□□ -0.59
USP8-217ENST00000561211 ZBTB22O15209 634 aa11.26□□□□□ -0.61
USP8-217ENST00000561211 POLA2Q14181 598 aa11.26□□□□□ -0.61
USP8-217ENST00000561211 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
USP8-217ENST00000561211 POTEHQ6S545 545 aa11.13□□□□□ -0.63
USP8-217ENST00000561211 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
USP8-217ENST00000561211 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
USP8-217ENST00000561211 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
USP8-217ENST00000561211 ATXN8OSP0DMR3 200 aa11.01□□□□□ -0.65
USP8-217ENST00000561211 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
USP8-217ENST00000561211 CHRDL2Q6WN34 429 aa10.88□□□□□ -0.67
USP8-217ENST00000561211 CSRNP3Q8WYN3 585 aa10.87□□□□□ -0.67
USP8-217ENST00000561211 AKT1S1Q96B36 256 aa10.87□□□□□ -0.67
USP8-217ENST00000561211 FBLN2P98095 1184 aa10.78□□□□□ -0.68
USP8-217ENST00000561211 REM2Q8IYK8 340 aaPredicted RBP10.78□□□□□ -0.68
USP8-217ENST00000561211 MKRN4PQ13434 485 aaPredicted RBP10.72□□□□□ -0.69
USP8-217ENST00000561211 SPDYE2BA6NHP3 402 aa10.69□□□□□ -0.7
USP8-217ENST00000561211 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
USP8-217ENST00000561211 SPDYE6P0CI01 402 aa10.69□□□□□ -0.7
USP8-217ENST00000561211 SPDYE2Q495Y8 402 aa10.69□□□□□ -0.7
USP8-217ENST00000561211 PIP4P2Q8N4L2 257 aa10.63□□□□□ -0.71
USP8-217ENST00000561211 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
USP8-217ENST00000561211 SSUH2Q9Y2M2 353 aa10.57□□□□□ -0.72
USP8-217ENST00000561211 FXR2P51116 673 aaKnown RBP eCLIP10.56□□□□□ -0.725e-6■■■□□ 14.9
USP8-217ENST00000561211 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
USP8-217ENST00000561211 CLEC11AQ9Y240 323 aa10.49□□□□□ -0.73
USP8-217ENST00000561211 SP7Q8TDD2 431 aaPredicted RBP10.44□□□□□ -0.74
USP8-217ENST00000561211 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
USP8-217ENST00000561211 HAX1O00165 279 aa10.42□□□□□ -0.74
USP8-217ENST00000561211 PRKAR2AP13861 404 aaKnown RBP10.4□□□□□ -0.74
USP8-217ENST00000561211 PRR29P0C7W0 189 aa10.31□□□□□ -0.76
USP8-217ENST00000561211 EVX2Q03828 476 aa10.3□□□□□ -0.76
USP8-217ENST00000561211 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
USP8-217ENST00000561211 C19orf67A6NJJ6 358 aa10.22□□□□□ -0.77
USP8-217ENST00000561211 SPDYE4A6NLX3 237 aa10.22□□□□□ -0.77
USP8-217ENST00000561211 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
USP8-217ENST00000561211 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
USP8-217ENST00000561211 CREBZFQ9NS37 354 aa10.08□□□□□ -0.8
USP8-217ENST00000561211 GABBR2O75899 941 aa10.07□□□□□ -0.8
USP8-217ENST00000561211 CD44P16070 742 aaKnown RBP10.07□□□□□ -0.8
USP8-217ENST00000561211 PROM2Q8N271 834 aa9.98□□□□□ -0.81
USP8-217ENST00000561211 ZRANB1Q9UGI0 708 aa9.93□□□□□ -0.82
USP8-217ENST00000561211 MNX1P50219 401 aaPredicted RBP9.91□□□□□ -0.82
USP8-217ENST00000561211 ZNF579Q8NAF0 562 aaKnown RBP9.91□□□□□ -0.82
USP8-217ENST00000561211 CLCN6P51797 869 aa9.88□□□□□ -0.83
USP8-217ENST00000561211 NPM1P06748 294 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP8-217ENST00000561211 POTEIP0CG38 1075 aa9.86□□□□□ -0.83
USP8-217ENST00000561211 PAK3O75914 559 aaPredicted RBP9.85□□□□□ -0.83
USP8-217ENST00000561211 PHF12Q96QT6 1004 aa9.81□□□□□ -0.84
USP8-217ENST00000561211 GALR2O43603 387 aaPredicted RBP9.8□□□□□ -0.84
USP8-217ENST00000561211 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
USP8-217ENST00000561211 FKBP8Q14318 412 aa9.79□□□□□ -0.84
USP8-217ENST00000561211 LHX8Q68G74 356 aa9.79□□□□□ -0.84
USP8-217ENST00000561211 MIER1Q8N108 512 aa9.73□□□□□ -0.85
USP8-217ENST00000561211 PLEKHG5O94827 1062 aa9.72□□□□□ -0.85
USP8-217ENST00000561211 TSPYL2Q9H2G4 693 aaPredicted RBP9.71□□□□□ -0.86
USP8-217ENST00000561211 MS4A3Q96HJ5 214 aa9.68□□□□□ -0.86
USP8-217ENST00000561211 PLCD3Q8N3E9 789 aa9.67□□□□□ -0.86
USP8-217ENST00000561211 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 303.6 ms