Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ABCD1P33897 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ABCD1P33897 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.54■■□□□ 1.04
ABCD1P33897 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ABCD1P33897 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.54■■□□□ 1.04
ABCD1P33897 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ABCD1P33897 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ABCD1P33897 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ABCD1P33897 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ABCD1P33897 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ABCD1P33897 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.54■■□□□ 1.04
ABCD1P33897 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ABCD1P33897 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ABCD1P33897 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.54■■□□□ 1.04
ABCD1P33897 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCD1P33897 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.53■■□□□ 1.04
ABCD1P33897 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCD1P33897 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ABCD1P33897 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ABCD1P33897 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ABCD1P33897 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.53■■□□□ 1.04
ABCD1P33897 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCD1P33897 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.53■■□□□ 1.04
ABCD1P33897 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.53■■□□□ 1.04
ABCD1P33897 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.53■■□□□ 1.04
ABCD1P33897 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCD1P33897 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCD1P33897 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
ABCD1P33897 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCD1P33897 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCD1P33897 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCD1P33897 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ABCD1P33897 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.52■■□□□ 1.04
ABCD1P33897 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ABCD1P33897 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ABCD1P33897 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCD1P33897 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ABCD1P33897 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCD1P33897 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ABCD1P33897 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCD1P33897 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ABCD1P33897 AL353807.1-201ENST00000427475 662 ntBASIC21.52■■□□□ 1.04
ABCD1P33897 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ABCD1P33897 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.52■■□□□ 1.04
ABCD1P33897 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.52■■□□□ 1.04
ABCD1P33897 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.52■■□□□ 1.04
ABCD1P33897 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.52■■□□□ 1.04
ABCD1P33897 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
ABCD1P33897 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCD1P33897 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.52■■□□□ 1.04
ABCD1P33897 KRT8P8-201ENST00000434750 1448 ntBASIC21.52■■□□□ 1.04
ABCD1P33897 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCD1P33897 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ABCD1P33897 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCD1P33897 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
ABCD1P33897 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ABCD1P33897 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ABCD1P33897 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.52■■□□□ 1.03
ABCD1P33897 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.51■■□□□ 1.03
ABCD1P33897 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCD1P33897 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCD1P33897 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.51■■□□□ 1.03
ABCD1P33897 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.51■■□□□ 1.03
ABCD1P33897 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.51■■□□□ 1.03
ABCD1P33897 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.51■■□□□ 1.03
ABCD1P33897 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.51■■□□□ 1.03
ABCD1P33897 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCD1P33897 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCD1P33897 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCD1P33897 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCD1P33897 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ABCD1P33897 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.51■■□□□ 1.03
ABCD1P33897 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.51■■□□□ 1.03
ABCD1P33897 AL135905.2-201ENST00000584934 1404 ntBASIC21.51■■□□□ 1.03
ABCD1P33897 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCD1P33897 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.51■■□□□ 1.03
ABCD1P33897 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ABCD1P33897 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ABCD1P33897 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ABCD1P33897 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ABCD1P33897 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.5■■□□□ 1.03
ABCD1P33897 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ABCD1P33897 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.5■■□□□ 1.03
ABCD1P33897 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.5■■□□□ 1.03
ABCD1P33897 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ABCD1P33897 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.5■■□□□ 1.03
ABCD1P33897 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.5■■□□□ 1.03
ABCD1P33897 AC098590.1-201ENST00000468126 897 ntBASIC21.5■■□□□ 1.03
ABCD1P33897 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.5■■□□□ 1.03
ABCD1P33897 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.5■■□□□ 1.03
ABCD1P33897 RARRES2P10-201ENST00000564312 460 ntBASIC21.5■■□□□ 1.03
ABCD1P33897 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ABCD1P33897 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ABCD1P33897 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ABCD1P33897 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ABCD1P33897 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.5■■□□□ 1.03
ABCD1P33897 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.5■■□□□ 1.03
ABCD1P33897 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ABCD1P33897 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ABCD1P33897 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms