Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSP1P33241 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.74■□□□□ 0.75
LSP1P33241 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LSP1P33241 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.74■□□□□ 0.75
LSP1P33241 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LSP1P33241 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSP1P33241 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSP1P33241 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.74■□□□□ 0.75
LSP1P33241 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSP1P33241 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LSP1P33241 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSP1P33241 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
LSP1P33241 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.74■□□□□ 0.75
LSP1P33241 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.74■□□□□ 0.75
LSP1P33241 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.74■□□□□ 0.75
LSP1P33241 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSP1P33241 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.73■□□□□ 0.75
LSP1P33241 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSP1P33241 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LSP1P33241 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSP1P33241 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
LSP1P33241 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSP1P33241 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LSP1P33241 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSP1P33241 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSP1P33241 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSP1P33241 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LSP1P33241 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSP1P33241 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.73■□□□□ 0.75
LSP1P33241 AC008175.2-201ENST00000612840 297 ntBASIC19.73■□□□□ 0.75
LSP1P33241 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSP1P33241 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LSP1P33241 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LSP1P33241 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LSP1P33241 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LSP1P33241 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.73■□□□□ 0.75
LSP1P33241 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.73■□□□□ 0.75
LSP1P33241 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LSP1P33241 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.72■□□□□ 0.75
LSP1P33241 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
LSP1P33241 AC067852.2-201ENST00000590513 2313 ntBASIC19.72■□□□□ 0.75
LSP1P33241 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LSP1P33241 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSP1P33241 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LSP1P33241 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.71■□□□□ 0.75
LSP1P33241 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LSP1P33241 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.71■□□□□ 0.75
LSP1P33241 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.71■□□□□ 0.75
LSP1P33241 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.71■□□□□ 0.75
LSP1P33241 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LSP1P33241 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.71■□□□□ 0.75
LSP1P33241 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.71■□□□□ 0.75
LSP1P33241 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.71■□□□□ 0.75
LSP1P33241 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSP1P33241 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.71■□□□□ 0.75
LSP1P33241 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LSP1P33241 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.71■□□□□ 0.75
LSP1P33241 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LSP1P33241 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LSP1P33241 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LSP1P33241 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSP1P33241 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LSP1P33241 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSP1P33241 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.7■□□□□ 0.74
LSP1P33241 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LSP1P33241 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.7■□□□□ 0.74
LSP1P33241 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LSP1P33241 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
LSP1P33241 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.7■□□□□ 0.74
LSP1P33241 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LSP1P33241 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LSP1P33241 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LSP1P33241 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSP1P33241 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LSP1P33241 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LSP1P33241 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms