Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTR1EP28566 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HTR1EP28566 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.81■□□□□ 0.6
HTR1EP28566 RARRES2P4-201ENST00000514074 484 ntBASIC18.81■□□□□ 0.6
HTR1EP28566 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.81■□□□□ 0.6
HTR1EP28566 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.81■□□□□ 0.6
HTR1EP28566 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.81■□□□□ 0.6
HTR1EP28566 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.81■□□□□ 0.6
HTR1EP28566 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTR1EP28566 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTR1EP28566 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTR1EP28566 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.81■□□□□ 0.6
HTR1EP28566 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTR1EP28566 AC068338.2-201ENST00000563278 1430 ntBASIC18.81■□□□□ 0.6
HTR1EP28566 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HTR1EP28566 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.81■□□□□ 0.6
HTR1EP28566 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTR1EP28566 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.8■□□□□ 0.6
HTR1EP28566 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTR1EP28566 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HTR1EP28566 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.8■□□□□ 0.6
HTR1EP28566 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.8■□□□□ 0.6
HTR1EP28566 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.8■□□□□ 0.6
HTR1EP28566 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.8■□□□□ 0.6
HTR1EP28566 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.8■□□□□ 0.6
HTR1EP28566 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.8■□□□□ 0.6
HTR1EP28566 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
HTR1EP28566 OR10C1-204ENST00000622521 1039 ntBASIC18.8■□□□□ 0.6
HTR1EP28566 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.8■□□□□ 0.6
HTR1EP28566 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTR1EP28566 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HTR1EP28566 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTR1EP28566 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTR1EP28566 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTR1EP28566 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HTR1EP28566 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTR1EP28566 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTR1EP28566 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HTR1EP28566 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
HTR1EP28566 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.79■□□□□ 0.6
HTR1EP28566 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.79■□□□□ 0.6
HTR1EP28566 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.79■□□□□ 0.6
HTR1EP28566 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HTR1EP28566 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.79■□□□□ 0.6
HTR1EP28566 AC098590.1-201ENST00000468126 897 ntBASIC18.79■□□□□ 0.6
HTR1EP28566 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
HTR1EP28566 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.79■□□□□ 0.6
HTR1EP28566 AC092118.2-201ENST00000613495 667 ntBASIC18.79■□□□□ 0.6
HTR1EP28566 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.79■□□□□ 0.6
HTR1EP28566 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.79■□□□□ 0.6
HTR1EP28566 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.79■□□□□ 0.6
HTR1EP28566 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.79■□□□□ 0.6
HTR1EP28566 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTR1EP28566 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.79■□□□□ 0.6
HTR1EP28566 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTR1EP28566 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTR1EP28566 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTR1EP28566 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTR1EP28566 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTR1EP28566 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTR1EP28566 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.78■□□□□ 0.6
HTR1EP28566 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HTR1EP28566 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HTR1EP28566 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.78■□□□□ 0.6
HTR1EP28566 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.78■□□□□ 0.6
HTR1EP28566 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTR1EP28566 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTR1EP28566 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTR1EP28566 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.78■□□□□ 0.6
HTR1EP28566 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.78■□□□□ 0.6
HTR1EP28566 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1EP28566 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HTR1EP28566 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1EP28566 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HTR1EP28566 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1EP28566 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.77■□□□□ 0.6
HTR1EP28566 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.77■□□□□ 0.6
HTR1EP28566 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTR1EP28566 ESRRAP1-201ENST00000400596 1257 ntBASIC18.77■□□□□ 0.6
HTR1EP28566 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.77■□□□□ 0.6
HTR1EP28566 PGM5P4-201ENST00000421970 445 ntBASIC18.77■□□□□ 0.6
HTR1EP28566 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.77■□□□□ 0.6
HTR1EP28566 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms