Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNB2P17787 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB2P17787 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CHRNB2P17787 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CHRNB2P17787 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB2P17787 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB2P17787 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB2P17787 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNB2P17787 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB2P17787 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB2P17787 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNB2P17787 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNB2P17787 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CHRNB2P17787 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHRNB2P17787 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNB2P17787 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNB2P17787 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNB2P17787 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.87■□□□□ 0.93
CHRNB2P17787 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.87■□□□□ 0.93
CHRNB2P17787 AC120498.8-201ENST00000614275 531 ntBASIC20.87■□□□□ 0.93
CHRNB2P17787 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNB2P17787 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CHRNB2P17787 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB2P17787 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNB2P17787 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNB2P17787 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.86■□□□□ 0.93
CHRNB2P17787 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB2P17787 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.86■□□□□ 0.93
CHRNB2P17787 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CHRNB2P17787 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB2P17787 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHRNB2P17787 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB2P17787 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB2P17787 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB2P17787 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB2P17787 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNB2P17787 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CHRNB2P17787 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CHRNB2P17787 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHRNB2P17787 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNB2P17787 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.85■□□□□ 0.93
CHRNB2P17787 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.85■□□□□ 0.93
CHRNB2P17787 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.85■□□□□ 0.93
CHRNB2P17787 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNB2P17787 SOX15-203ENST00000570788 1093 ntBASIC20.85■□□□□ 0.93
CHRNB2P17787 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNB2P17787 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CHRNB2P17787 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHRNB2P17787 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNB2P17787 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNB2P17787 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNB2P17787 AL032819.2-201ENST00000624543 2162 ntBASIC20.85■□□□□ 0.93
CHRNB2P17787 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNB2P17787 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CHRNB2P17787 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNB2P17787 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.84■□□□□ 0.93
CHRNB2P17787 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB2P17787 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.84■□□□□ 0.93
CHRNB2P17787 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB2P17787 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB2P17787 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB2P17787 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CHRNB2P17787 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB2P17787 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB2P17787 AL355802.2-201ENST00000402069 882 ntBASIC20.84■□□□□ 0.93
CHRNB2P17787 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB2P17787 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.84■□□□□ 0.93
CHRNB2P17787 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHRNB2P17787 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB2P17787 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.84■□□□□ 0.93
CHRNB2P17787 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRNB2P17787 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNB2P17787 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNB2P17787 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNB2P17787 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHRNB2P17787 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.83■□□□□ 0.93
CHRNB2P17787 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.83■□□□□ 0.93
CHRNB2P17787 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRNB2P17787 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms