Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRKCAP17252 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRKCAP17252 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRKCAP17252 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PRKCAP17252 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRKCAP17252 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PRKCAP17252 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRKCAP17252 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRKCAP17252 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRKCAP17252 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.16■□□□□ 0.5
PRKCAP17252 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.16■□□□□ 0.5
PRKCAP17252 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
PRKCAP17252 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PRKCAP17252 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRKCAP17252 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.16■□□□□ 0.5
PRKCAP17252 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.16■□□□□ 0.5
PRKCAP17252 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.16■□□□□ 0.5
PRKCAP17252 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.16■□□□□ 0.5
PRKCAP17252 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.16■□□□□ 0.5
PRKCAP17252 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRKCAP17252 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRKCAP17252 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.16■□□□□ 0.5
PRKCAP17252 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRKCAP17252 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PRKCAP17252 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.15■□□□□ 0.5
PRKCAP17252 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PRKCAP17252 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PRKCAP17252 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 AC005082.1-201ENST00000413042 2259 ntBASIC18.15■□□□□ 0.5
PRKCAP17252 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.15■□□□□ 0.5
PRKCAP17252 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.15■□□□□ 0.5
PRKCAP17252 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PRKCAP17252 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PRKCAP17252 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PRKCAP17252 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.15■□□□□ 0.5
PRKCAP17252 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.15■□□□□ 0.5
PRKCAP17252 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.15■□□□□ 0.5
PRKCAP17252 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.15■□□□□ 0.5
PRKCAP17252 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PRKCAP17252 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PRKCAP17252 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.15■□□□□ 0.5
PRKCAP17252 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRKCAP17252 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRKCAP17252 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PRKCAP17252 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRKCAP17252 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRKCAP17252 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRKCAP17252 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.14■□□□□ 0.49
PRKCAP17252 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PRKCAP17252 AC092368.3-202ENST00000574180 1591 ntBASIC18.14■□□□□ 0.49
PRKCAP17252 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PRKCAP17252 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.14■□□□□ 0.49
PRKCAP17252 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.14■□□□□ 0.49
PRKCAP17252 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
PRKCAP17252 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.14■□□□□ 0.49
PRKCAP17252 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.14■□□□□ 0.49
PRKCAP17252 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.14■□□□□ 0.49
PRKCAP17252 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.14■□□□□ 0.49
PRKCAP17252 AC060766.5-201ENST00000590539 871 ntBASIC18.14■□□□□ 0.49
PRKCAP17252 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PRKCAP17252 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.14■□□□□ 0.49
PRKCAP17252 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.14■□□□□ 0.49
PRKCAP17252 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.14■□□□□ 0.49
PRKCAP17252 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRKCAP17252 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRKCAP17252 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms