Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD44P16070 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD44P16070 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.77■■□□□ 1.08
CD44P16070 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.77■■□□□ 1.08
CD44P16070 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.77■■□□□ 1.08
CD44P16070 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CD44P16070 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.77■■□□□ 1.08
CD44P16070 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD44P16070 MIR935-201ENST00000401179 91 ntBASIC21.77■■□□□ 1.08
CD44P16070 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.77■■□□□ 1.08
CD44P16070 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.77■■□□□ 1.08
CD44P16070 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.77■■□□□ 1.08
CD44P16070 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD44P16070 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.77■■□□□ 1.08
CD44P16070 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD44P16070 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.77■■□□□ 1.07
CD44P16070 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CD44P16070 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.76■■□□□ 1.07
CD44P16070 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CD44P16070 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.76■■□□□ 1.07
CD44P16070 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CD44P16070 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD44P16070 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.76■■□□□ 1.07
CD44P16070 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CD44P16070 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC21.76■■□□□ 1.07
CD44P16070 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CD44P16070 GUSBP6-202ENST00000438529 1198 ntBASIC21.76■■□□□ 1.07
CD44P16070 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.76■■□□□ 1.07
CD44P16070 AC083906.2-201ENST00000511578 360 ntBASIC21.76■■□□□ 1.07
CD44P16070 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CD44P16070 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.76■■□□□ 1.07
CD44P16070 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD44P16070 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.76■■□□□ 1.07
CD44P16070 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.76■■□□□ 1.07
CD44P16070 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.76■■□□□ 1.07
CD44P16070 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CD44P16070 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 TFP1-202ENST00000475455 1573 ntBASIC21.75■■□□□ 1.07
CD44P16070 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.75■■□□□ 1.07
CD44P16070 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CD44P16070 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.75■■□□□ 1.07
CD44P16070 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.75■■□□□ 1.07
CD44P16070 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.75■■□□□ 1.07
CD44P16070 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.75■■□□□ 1.07
CD44P16070 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
CD44P16070 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD44P16070 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.75■■□□□ 1.07
CD44P16070 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD44P16070 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CD44P16070 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD44P16070 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CD44P16070 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD44P16070 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.74■■□□□ 1.07
CD44P16070 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CD44P16070 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD44P16070 AC124283.5-201ENST00000624661 1809 ntBASIC21.74■■□□□ 1.07
CD44P16070 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD44P16070 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.74■■□□□ 1.07
CD44P16070 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.74■■□□□ 1.07
CD44P16070 DUSP5P2-201ENST00000426873 1033 ntBASIC21.74■■□□□ 1.07
CD44P16070 MTND4LP12-201ENST00000448237 295 ntBASIC21.74■■□□□ 1.07
CD44P16070 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.74■■□□□ 1.07
CD44P16070 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CD44P16070 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.74■■□□□ 1.07
CD44P16070 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.74■■□□□ 1.07
CD44P16070 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.74■■□□□ 1.07
CD44P16070 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.74■■□□□ 1.07
CD44P16070 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD44P16070 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD44P16070 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CD44P16070 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CD44P16070 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD44P16070 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD44P16070 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD44P16070 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.73■■□□□ 1.07
CD44P16070 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD44P16070 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CD44P16070 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD44P16070 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CD44P16070 AC005829.2-201ENST00000571422 1056 ntBASIC21.73■■□□□ 1.07
CD44P16070 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.73■■□□□ 1.07
CD44P16070 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.73■■□□□ 1.07
CD44P16070 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD44P16070 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CD44P16070 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.73■■□□□ 1.07
CD44P16070 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CD44P16070 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD44P16070 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CD44P16070 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD44P16070 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms