Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1BO75841 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1BO75841 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.16■□□□□ 0.34
UPK1BO75841 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1BO75841 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK1BO75841 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1BO75841 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1BO75841 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK1BO75841 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK1BO75841 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
UPK1BO75841 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.15■□□□□ 0.34
UPK1BO75841 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK1BO75841 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UPK1BO75841 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1BO75841 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.15■□□□□ 0.34
UPK1BO75841 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1BO75841 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
UPK1BO75841 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1BO75841 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.15■□□□□ 0.34
UPK1BO75841 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.15■□□□□ 0.34
UPK1BO75841 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.15■□□□□ 0.34
UPK1BO75841 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
UPK1BO75841 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.15■□□□□ 0.34
UPK1BO75841 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1BO75841 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1BO75841 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UPK1BO75841 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
UPK1BO75841 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1BO75841 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1BO75841 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1BO75841 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
UPK1BO75841 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.15■□□□□ 0.34
UPK1BO75841 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
UPK1BO75841 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.14■□□□□ 0.34
UPK1BO75841 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 AC141586.5-201ENST00000624546 2050 ntBASIC17.14■□□□□ 0.33
UPK1BO75841 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
UPK1BO75841 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK1BO75841 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 ABALON-201ENST00000629058 1903 ntBASIC17.14■□□□□ 0.33
UPK1BO75841 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK1BO75841 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.14■□□□□ 0.33
UPK1BO75841 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.14■□□□□ 0.33
UPK1BO75841 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK1BO75841 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK1BO75841 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
UPK1BO75841 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.14■□□□□ 0.33
UPK1BO75841 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.14■□□□□ 0.33
UPK1BO75841 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPK1BO75841 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.14■□□□□ 0.33
UPK1BO75841 AC021242.3-201ENST00000607598 1377 ntBASIC17.14■□□□□ 0.33
UPK1BO75841 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.13■□□□□ 0.33
UPK1BO75841 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.13■□□□□ 0.33
UPK1BO75841 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK1BO75841 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK1BO75841 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK1BO75841 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK1BO75841 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.13■□□□□ 0.33
UPK1BO75841 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
UPK1BO75841 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK1BO75841 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.13■□□□□ 0.33
UPK1BO75841 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UPK1BO75841 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.13■□□□□ 0.33
UPK1BO75841 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
UPK1BO75841 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPK1BO75841 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms