Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KCNAB3O43448 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
KCNAB3O43448 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KCNAB3O43448 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KCNAB3O43448 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
KCNAB3O43448 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KCNAB3O43448 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.65■□□□□ 0.26
KCNAB3O43448 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.65■□□□□ 0.26
KCNAB3O43448 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KCNAB3O43448 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KCNAB3O43448 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
KCNAB3O43448 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
KCNAB3O43448 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNAB3O43448 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
KCNAB3O43448 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNAB3O43448 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNAB3O43448 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNAB3O43448 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.64■□□□□ 0.25
KCNAB3O43448 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNAB3O43448 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KCNAB3O43448 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KCNAB3O43448 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KCNAB3O43448 AC211429.1-201ENST00000415277 523 ntBASIC16.64■□□□□ 0.25
KCNAB3O43448 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.64■□□□□ 0.25
KCNAB3O43448 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNAB3O43448 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.64■□□□□ 0.25
KCNAB3O43448 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.64■□□□□ 0.25
KCNAB3O43448 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.64■□□□□ 0.25
KCNAB3O43448 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNAB3O43448 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNAB3O43448 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
KCNAB3O43448 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNAB3O43448 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNAB3O43448 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNAB3O43448 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.64■□□□□ 0.25
KCNAB3O43448 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KCNAB3O43448 KRT16P2-201ENST00000414673 1423 ntBASIC16.63■□□□□ 0.25
KCNAB3O43448 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNAB3O43448 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNAB3O43448 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.63■□□□□ 0.25
KCNAB3O43448 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KCNAB3O43448 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KCNAB3O43448 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
KCNAB3O43448 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
KCNAB3O43448 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.63■□□□□ 0.25
KCNAB3O43448 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
KCNAB3O43448 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 AC073912.3-201ENST00000624414 853 ntBASIC16.63■□□□□ 0.25
KCNAB3O43448 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KCNAB3O43448 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KCNAB3O43448 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KCNAB3O43448 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNAB3O43448 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
KCNAB3O43448 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
KCNAB3O43448 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNAB3O43448 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNAB3O43448 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNAB3O43448 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNAB3O43448 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNAB3O43448 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNAB3O43448 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNAB3O43448 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KCNAB3O43448 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNAB3O43448 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNAB3O43448 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNAB3O43448 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KCNAB3O43448 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNAB3O43448 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.62■□□□□ 0.25
KCNAB3O43448 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KCNAB3O43448 AC007322.1-201ENST00000426983 750 ntBASIC16.62■□□□□ 0.25
KCNAB3O43448 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.62■□□□□ 0.25
KCNAB3O43448 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.62■□□□□ 0.25
KCNAB3O43448 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms