Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CHL1O00533 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CHL1O00533 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.39■■□□□ 1.65
CHL1O00533 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.65
CHL1O00533 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.65
CHL1O00533 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CHL1O00533 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.65
CHL1O00533 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHL1O00533 AL445675.2-201ENST00000620291 557 ntBASIC25.38■■□□□ 1.65
CHL1O00533 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC25.38■■□□□ 1.65
CHL1O00533 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CHL1O00533 LBX2-AS1-202ENST00000603175 2083 ntBASIC25.38■■□□□ 1.65
CHL1O00533 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHL1O00533 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.38■■□□□ 1.65
CHL1O00533 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHL1O00533 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.37■■□□□ 1.65
CHL1O00533 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.37■■□□□ 1.65
CHL1O00533 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.37■■□□□ 1.65
CHL1O00533 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.37■■□□□ 1.65
CHL1O00533 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.37■■□□□ 1.65
CHL1O00533 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.37■■□□□ 1.65
CHL1O00533 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
CHL1O00533 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHL1O00533 KRT8P8-201ENST00000434750 1448 ntBASIC25.37■■□□□ 1.65
CHL1O00533 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CHL1O00533 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.36■■□□□ 1.65
CHL1O00533 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.36■■□□□ 1.65
CHL1O00533 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 MIR4785-201ENST00000585005 73 ntBASIC25.36■■□□□ 1.65
CHL1O00533 AC026471.5-201ENST00000615068 467 ntBASIC25.36■■□□□ 1.65
CHL1O00533 HLA-A-209ENST00000638375 975 ntBASIC25.36■■□□□ 1.65
CHL1O00533 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
CHL1O00533 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC25.36■■□□□ 1.65
CHL1O00533 KRT17P2-201ENST00000300992 1314 ntBASIC25.36■■□□□ 1.65
CHL1O00533 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHL1O00533 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHL1O00533 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.35■■□□□ 1.65
CHL1O00533 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHL1O00533 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHL1O00533 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CHL1O00533 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHL1O00533 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHL1O00533 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.35■■□□□ 1.65
CHL1O00533 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.35■■□□□ 1.65
CHL1O00533 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHL1O00533 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CHL1O00533 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHL1O00533 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25.35■■□□□ 1.65
CHL1O00533 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHL1O00533 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CHL1O00533 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHL1O00533 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.34■■□□□ 1.65
CHL1O00533 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.34■■□□□ 1.65
CHL1O00533 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.34■■□□□ 1.65
CHL1O00533 CR392000.1-201ENST00000624770 1228 ntBASIC25.34■■□□□ 1.65
CHL1O00533 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.34■■□□□ 1.65
CHL1O00533 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHL1O00533 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.34■■□□□ 1.65
CHL1O00533 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CHL1O00533 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.34■■□□□ 1.65
CHL1O00533 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms