Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC53A6NM62 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC53A6NM62 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC53A6NM62 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC53A6NM62 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC53A6NM62 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC53A6NM62 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC53A6NM62 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC53A6NM62 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC53A6NM62 AC073111.5-205ENST00000641717 521 ntBASIC21.2■□□□□ 0.98
LRRC53A6NM62 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
LRRC53A6NM62 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC53A6NM62 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC53A6NM62 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 AC080038.1-201ENST00000611274 1154 ntBASIC21.19■□□□□ 0.98
LRRC53A6NM62 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC53A6NM62 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC53A6NM62 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC53A6NM62 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC53A6NM62 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC53A6NM62 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC53A6NM62 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 IKBKGP1-201ENST00000612193 1073 ntBASIC21.18■□□□□ 0.98
LRRC53A6NM62 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC53A6NM62 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC53A6NM62 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC53A6NM62 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC53A6NM62 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC53A6NM62 MKRN4P-201ENST00000444706 1521 ntBASIC21.18■□□□□ 0.98
LRRC53A6NM62 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC53A6NM62 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRRC53A6NM62 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC53A6NM62 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC53A6NM62 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC53A6NM62 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRC53A6NM62 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC53A6NM62 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC53A6NM62 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRC53A6NM62 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRC53A6NM62 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.17■□□□□ 0.98
LRRC53A6NM62 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LRRC53A6NM62 AC116351.2-201ENST00000606540 1585 ntBASIC21.17■□□□□ 0.98
LRRC53A6NM62 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC53A6NM62 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC53A6NM62 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC53A6NM62 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC53A6NM62 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC53A6NM62 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC53A6NM62 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC53A6NM62 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC53A6NM62 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC53A6NM62 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC53A6NM62 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC53A6NM62 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC53A6NM62 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 CDCA4P2-201ENST00000441182 718 ntBASIC21.16■□□□□ 0.98
LRRC53A6NM62 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC53A6NM62 AC105036.2-201ENST00000569468 176 ntBASIC21.16■□□□□ 0.98
LRRC53A6NM62 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms