Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00959A0A1B0GUT2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00959A0A1B0GUT2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC00959A0A1B0GUT2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00959A0A1B0GUT2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00959A0A1B0GUT2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00959A0A1B0GUT2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 TNXA-203ENST00000507684 2038 ntBASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 AC007322.1-201ENST00000426983 750 ntBASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 AC006015.1-201ENST00000429970 570 ntBASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 C2orf69P4-201ENST00000565394 541 ntBASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 BID-214ENST00000617586 542 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 OR10C1-204ENST00000622521 1039 ntBASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LINC00959A0A1B0GUT2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 AC010980.2-201ENST00000587099 1412 ntBASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 AL032819.2-201ENST00000624543 2162 ntBASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.39□□□□□ -0.27
LINC00959A0A1B0GUT2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00959A0A1B0GUT2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms