Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC026271.2-201ENST00000428091 497 ntBASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RNF103-CHMP3A0A140T963 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC093484.2-201ENST00000580996 2166 ntBASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF103-CHMP3A0A140T963 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 BX119927.1-201ENST00000636596 1552 ntBASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 CNN2P6-201ENST00000439038 900 ntBASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF103-CHMP3A0A140T963 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF103-CHMP3A0A140T963 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RNF103-CHMP3A0A140T963 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF103-CHMP3A0A140T963 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RNF103-CHMP3A0A140T963 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
RNF103-CHMP3A0A140T963 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 RARRES2P4-201ENST00000514074 484 ntBASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 DUX4L16-201ENST00000555130 1264 ntBASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms