Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 PHGDH-210ENST00000641115 1638 ntBASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 AL591742.1-201ENST00000604433 565 ntBASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRBV27A0A0K0K1C4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 HLA-G-202ENST00000376815 851 ntBASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 HLA-G-203ENST00000376818 1127 ntBASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 AL162412.1-201ENST00000567129 965 ntBASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 AC005082.1-201ENST00000413042 2259 ntBASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV27A0A0K0K1C4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRBV27A0A0K0K1C4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV27A0A0K0K1C4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms