Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC187A0A096LP49 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC187A0A096LP49 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC187A0A096LP49 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 AC004951.3-201ENST00000418645 1148 ntBASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 AC022616.7-201ENST00000525383 220 ntBASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 AC116562.4-202ENST00000641738 218 ntBASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC187A0A096LP49 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 PHGDH-210ENST00000641115 1638 ntBASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 CCR12P-201ENST00000446203 998 ntBASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 AC063952.2-201ENST00000498792 1227 ntBASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC187A0A096LP49 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 INGX-201ENST00000359239 846 ntBASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 PKD1P6-201ENST00000343738 4769 ntBASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC187A0A096LP49 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 MFAP1P1-201ENST00000442257 1255 ntBASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 FAM207BP-201ENST00000447172 505 ntBASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 HLA-A-209ENST00000638375 975 ntBASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC187A0A096LP49 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC187A0A096LP49 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms