Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 KRT18P14-201ENST00000534205 1250 ntBASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 AC087623.3-201ENST00000607047 1098 ntBASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 FP700111.2-201ENST00000619190 1892 ntBASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRAV9-2A0A087WT02 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV9-2A0A087WT02 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 PRORSD1P-202ENST00000563365 2154 ntBASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV9-2A0A087WT02 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms