Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.12□□□□□ -1.11
PTCH1Q13635 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTCH1Q13635 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTCH1Q13635 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTCH1Q13635 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTCH1Q13635 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
PTCH1Q13635 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTCH1Q13635 DPY19L2P2-203ENST00000435536 1858 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 GAPDHP42-201ENST00000406848 981 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC8.12□□□□□ -1.11
PTCH1Q13635 FAR2P1-206ENST00000449736 709 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 RAB28P2-201ENST00000454299 641 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 RPL23AP40-201ENST00000487630 390 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 AC139365.2-201ENST00000517972 253 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTCH1Q13635 ELOCP28-201ENST00000590044 317 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 AC063977.5-201ENST00000601044 974 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 AC091193.1-201ENST00000604640 448 ntBASIC8.12□□□□□ -1.11
PTCH1Q13635 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.12□□□□□ -1.11
PTCH1Q13635 ALB-209ENST00000503124 1741 ntTSL 5 BASIC8.11□□□□□ -1.11
PTCH1Q13635 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
PTCH1Q13635 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PTCH1Q13635 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTCH1Q13635 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTCH1Q13635 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC8.11□□□□□ -1.11
PTCH1Q13635 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTCH1Q13635 CCDC162P-202ENST00000368966 6751 ntBASIC8.11□□□□□ -1.11
PTCH1Q13635 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.11□□□□□ -1.11
PTCH1Q13635 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTCH1Q13635 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
PTCH1Q13635 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTCH1Q13635 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTCH1Q13635 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.11□□□□□ -1.11
PTCH1Q13635 AC026951.1-201ENST00000559530 2459 ntBASIC8.11□□□□□ -1.11
PTCH1Q13635 AC018765.1-201ENST00000623357 3446 ntBASIC8.11□□□□□ -1.11
PTCH1Q13635 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTCH1Q13635 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC8.11□□□□□ -1.11
PTCH1Q13635 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PTCH1Q13635 AC015977.1-201ENST00000418887 292 ntBASIC8.11□□□□□ -1.11
PTCH1Q13635 RPS26P41-201ENST00000450370 284 ntBASIC8.11□□□□□ -1.11
PTCH1Q13635 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.11□□□□□ -1.11
PTCH1Q13635 RPL7AP6-201ENST00000477943 801 ntBASIC8.11□□□□□ -1.11
PTCH1Q13635 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC8.11□□□□□ -1.11
PTCH1Q13635 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC8.11□□□□□ -1.11
PTCH1Q13635 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.11□□□□□ -1.11
PTCH1Q13635 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.11□□□□□ -1.11
PTCH1Q13635 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC8.11□□□□□ -1.11
PTCH1Q13635 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.11□□□□□ -1.11
PTCH1Q13635 AC137695.1-201ENST00000604126 489 ntBASIC8.11□□□□□ -1.11
PTCH1Q13635 AL121612.2-201ENST00000612261 482 ntBASIC8.11□□□□□ -1.11
PTCH1Q13635 AL390318.1-201ENST00000624564 687 ntBASIC8.11□□□□□ -1.11
PTCH1Q13635 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTCH1Q13635 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTCH1Q13635 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.1□□□□□ -1.11
PTCH1Q13635 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTCH1Q13635 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
PTCH1Q13635 FBXL21-201ENST00000297158 1305 ntBASIC8.1□□□□□ -1.11
PTCH1Q13635 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTCH1Q13635 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.1□□□□□ -1.11
PTCH1Q13635 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC8.1□□□□□ -1.11
PTCH1Q13635 LINC01616-201ENST00000561816 2280 ntBASIC8.1□□□□□ -1.11
PTCH1Q13635 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.1□□□□□ -1.11
PTCH1Q13635 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTCH1Q13635 MIR223-201ENST00000385204 110 ntBASIC8.1□□□□□ -1.11
PTCH1Q13635 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
PTCH1Q13635 AL590762.4-201ENST00000425885 253 ntBASIC8.1□□□□□ -1.11
PTCH1Q13635 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC8.1□□□□□ -1.11
PTCH1Q13635 CCDC11P1-201ENST00000503137 1162 ntBASIC8.1□□□□□ -1.11
PTCH1Q13635 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.1□□□□□ -1.11
PTCH1Q13635 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
PTCH1Q13635 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
PTCH1Q13635 AC244502.2-201ENST00000543361 851 ntBASIC8.1□□□□□ -1.11
PTCH1Q13635 AC027667.1-201ENST00000545814 304 ntBASIC8.1□□□□□ -1.11
PTCH1Q13635 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC8.1□□□□□ -1.11
PTCH1Q13635 CLMN-206ENST00000556441 452 ntTSL 5 BASIC8.1□□□□□ -1.11
PTCH1Q13635 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTCH1Q13635 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTCH1Q13635 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTCH1Q13635 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTCH1Q13635 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.09□□□□□ -1.11
PTCH1Q13635 AC110716.2-201ENST00000563865 3945 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.09□□□□□ -1.11
PTCH1Q13635 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
PTCH1Q13635 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
PTCH1Q13635 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 U8.4-201ENST00000363626 134 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTCH1Q13635 RN7SKP213-201ENST00000410746 298 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC8.09□□□□□ -1.11
PTCH1Q13635 VN1R54P-201ENST00000435210 1049 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC8.09□□□□□ -1.11
PTCH1Q13635 AC245047.2-201ENST00000441060 530 ntBASIC8.09□□□□□ -1.11
PTCH1Q13635 VDAC2P4-201ENST00000452925 711 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms