RNA–Protein interactions for RNA: ENST00000239860.10

CCDC169-202, Transcript of coiled-coil domain containing 169, humanhuman

TSL 1 (best) BASIC

Gene CCDC169, Length 716 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC169-202ENST00000239860 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
CCDC169-202ENST00000239860 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
CCDC169-202ENST00000239860 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
CCDC169-202ENST00000239860 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
CCDC169-202ENST00000239860 FOXD1Q16676 465 aa18.82■□□□□ 0.6
CCDC169-202ENST00000239860 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
CCDC169-202ENST00000239860 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
CCDC169-202ENST00000239860 MSH5O43196 834 aa17.54■□□□□ 0.4
CCDC169-202ENST00000239860 PIAS4Q8N2W9 510 aaPredicted RBP17.45■□□□□ 0.38
CCDC169-202ENST00000239860 POTEDQ86YR6 584 aa17.44■□□□□ 0.38
CCDC169-202ENST00000239860 ADRA2BP18089 450 aa17.43■□□□□ 0.38
CCDC169-202ENST00000239860 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
CCDC169-202ENST00000239860 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
CCDC169-202ENST00000239860 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
CCDC169-202ENST00000239860 KCNA4P22459 653 aa15.75■□□□□ 0.11
CCDC169-202ENST00000239860 PPP4R3CPQ6ZMV5 832 aa15.54■□□□□ 0.08
CCDC169-202ENST00000239860 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
CCDC169-202ENST00000239860 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
CCDC169-202ENST00000239860 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
CCDC169-202ENST00000239860 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
CCDC169-202ENST00000239860 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
CCDC169-202ENST00000239860 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
CCDC169-202ENST00000239860 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
CCDC169-202ENST00000239860 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
CCDC169-202ENST00000239860 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
CCDC169-202ENST00000239860 RNF39Q9H2S5 420 aa15.04■□□□□ -0
CCDC169-202ENST00000239860 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
CCDC169-202ENST00000239860 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
CCDC169-202ENST00000239860 C1QBPQ07021 282 aaKnown RBP14.76□□□□□ -0.05
CCDC169-202ENST00000239860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
CCDC169-202ENST00000239860 ZBTB22O15209 634 aa14.48□□□□□ -0.09
CCDC169-202ENST00000239860 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
CCDC169-202ENST00000239860 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
CCDC169-202ENST00000239860 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
CCDC169-202ENST00000239860 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
CCDC169-202ENST00000239860 DSG3P32926 999 aa14.05□□□□□ -0.16
CCDC169-202ENST00000239860 CAPN15O75808 1086 aa13.99□□□□□ -0.17
CCDC169-202ENST00000239860 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
CCDC169-202ENST00000239860 ATXN8OSP0DMR3 200 aa13.81□□□□□ -0.2
CCDC169-202ENST00000239860 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
CCDC169-202ENST00000239860 ABCB7O75027 752 aa13.69□□□□□ -0.22
CCDC169-202ENST00000239860 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
CCDC169-202ENST00000239860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
CCDC169-202ENST00000239860 APLP2Q06481 763 aa13.68□□□□□ -0.22
CCDC169-202ENST00000239860 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
CCDC169-202ENST00000239860 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
CCDC169-202ENST00000239860 POTEHQ6S545 545 aa13.6□□□□□ -0.23
CCDC169-202ENST00000239860 NISCHQ9Y2I1 1504 aa13.53□□□□□ -0.24
CCDC169-202ENST00000239860 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
CCDC169-202ENST00000239860 FKBP8Q14318 412 aa13.42□□□□□ -0.26
CCDC169-202ENST00000239860 POLA2Q14181 598 aa13.39□□□□□ -0.27
CCDC169-202ENST00000239860 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
CCDC169-202ENST00000239860 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
CCDC169-202ENST00000239860 CHRDL2Q6WN34 429 aa13.11□□□□□ -0.31
CCDC169-202ENST00000239860 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
CCDC169-202ENST00000239860 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
CCDC169-202ENST00000239860 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
CCDC169-202ENST00000239860 OSCARQ8IYS5 282 aa12.96□□□□□ -0.33
CCDC169-202ENST00000239860 FBLN2P98095 1184 aa12.93□□□□□ -0.34
CCDC169-202ENST00000239860 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
CCDC169-202ENST00000239860 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
CCDC169-202ENST00000239860 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
CCDC169-202ENST00000239860 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
CCDC169-202ENST00000239860 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
CCDC169-202ENST00000239860 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
CCDC169-202ENST00000239860 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCDC169-202ENST00000239860 PROM2Q8N271 834 aa12.72□□□□□ -0.37
CCDC169-202ENST00000239860 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
CCDC169-202ENST00000239860 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
CCDC169-202ENST00000239860 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
CCDC169-202ENST00000239860 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
CCDC169-202ENST00000239860 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
CCDC169-202ENST00000239860 VASPP50552 380 aaPredicted RBP12.6□□□□□ -0.39
CCDC169-202ENST00000239860 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
CCDC169-202ENST00000239860 EVX2Q03828 476 aa12.53□□□□□ -0.4
CCDC169-202ENST00000239860 HAX1O00165 279 aa12.52□□□□□ -0.41
CCDC169-202ENST00000239860 ZNF692Q9BU19 519 aaPredicted RBP12.48□□□□□ -0.41
CCDC169-202ENST00000239860 IFNLR1Q8IU57 520 aaPredicted RBP12.45□□□□□ -0.42
CCDC169-202ENST00000239860 SPDYE1Q8NFV5 336 aaPredicted RBP12.45□□□□□ -0.42
CCDC169-202ENST00000239860 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
CCDC169-202ENST00000239860 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
CCDC169-202ENST00000239860 ABCC9O60706 1549 aa12.34□□□□□ -0.43
CCDC169-202ENST00000239860 STAG3Q9UJ98 1225 aa12.34□□□□□ -0.43
CCDC169-202ENST00000239860 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
CCDC169-202ENST00000239860 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC169-202ENST00000239860 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
CCDC169-202ENST00000239860 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
CCDC169-202ENST00000239860 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
CCDC169-202ENST00000239860 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
CCDC169-202ENST00000239860 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
CCDC169-202ENST00000239860 PKD2Q13563 968 aa12.22□□□□□ -0.45
CCDC169-202ENST00000239860 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
CCDC169-202ENST00000239860 MIER1Q8N108 512 aa12.19□□□□□ -0.46
CCDC169-202ENST00000239860 GABBR2O75899 941 aa12.16□□□□□ -0.46
CCDC169-202ENST00000239860 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
CCDC169-202ENST00000239860 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
CCDC169-202ENST00000239860 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
CCDC169-202ENST00000239860 ZBTB47Q9UFB7 747 aaPredicted RBP12.09□□□□□ -0.47
CCDC169-202ENST00000239860 FARP1Q9Y4F1 1045 aaPredicted RBP12.08□□□□□ -0.48
CCDC169-202ENST00000239860 CCDC180Q9P1Z9 1646 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms